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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ompR and yjcS are separated by 290 nucleotides
yjcS and ytcA are separated by 208 nucleotides
ytcA and mdtN are separated by 18 nucleotides
mdtN and mdtO overlap by 1 nucleotides
MCAODC_03250: ompR - DNA-binding response regulator, at 653,785 to 654,492
ompR
MCAODC_03255: yjcS - alkyl sulfatase YjcS, at 654,783 to 656,768
yjcS
MCAODC_03260: ytcA - Uncharacterized protein YtcA, at 656,977 to 657,252
ytcA
MCAODC_03265: mdtN - multidrug efflux transporter periplasmic adaptor subunit MdtN, at 657,271 to 658,302
mdtN
MCAODC_03270: mdtO - multidrug efflux transporter permease subunit MdtO, at 658,302 to 660,353
mdtO
Group
Condition
MCAODC
_03250
MCAODC
_03255
MCAODC
_03260
MCAODC
_03265
MCAODC
_03270
ompR
yjcS
ytcA
mdtN
mdtO
carbon source
Casamino-acids
+0.2
-0.0
-3.2
-0.1
+0.1
phage
Bas09
+0.1
-0.0
-1.7
-0.1
-0.1
phage
Bas14
+0.3
+0.0
-1.3
-0.3
-0.0
phage
EV240
+0.1
-0.2
-0.8
-0.1
-0.0
carbon source
D-Glucose
+0.2
+0.1
-0.9
+0.0
+0.1
carbon source
L-Arabinose
-0.2
+0.1
-0.4
+0.0
+0.1
carbon source
Casamino-acids
-0.1
+0.1
-0.3
-0.0
-0.0
phage
WM_Bas09
-0.2
-0.0
-0.2
-0.0
+0.1
carbon source
D-Glucose
+0.3
+0.3
-0.9
-0.1
+0.0
phage
WM_Bas41
-0.1
-0.0
-0.2
+0.2
-0.0
phage
WM_Bas09
+0.0
-0.1
-0.2
+0.1
+0.0
phage
TP9
+0.2
+0.1
-0.2
+0.0
-0.1
no phage control
Control_ECRC101_WM
+0.3
+0.0
-0.4
-0.0
-0.0
no phage control
Control_ECRC101_WM
-0.1
-0.1
+0.2
-0.1
-0.0
carbon source
L-Arabinose
+0.2
+0.0
-0.0
-0.2
-0.0
phage
WM_TP9
-0.0
+0.1
-0.0
+0.0
-0.0
phage
EV240
-0.3
-0.1
+0.5
+0.1
-0.0
phage
WM_Bas14
-0.1
+0.0
+0.1
+0.0
+0.2
phage
WM_RB68
+0.1
+0.0
+0.2
-0.0
-0.1
phage
WM_EV240
-0.1
+0.0
+0.3
+0.0
-0.0
carbon source
Sodium-DL-Lactate
+0.0
+0.1
+0.3
+0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.2
+0.1
+0.2
+0.2
+0.1
phage
Bas14
-0.1
-0.1
+0.9
+0.3
-0.1
phage
Bas09
+0.3
-0.0
+0.6
+0.2
-0.0
phage
WM_TP9
+0.1
+0.0
+0.8
+0.1
+0.0
phage
WM_EV240
-0.1
-0.0
+1.5
-0.1
+0.0
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