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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
MCAODC_03215 and rbsA are separated by 113 nucleotides
rbsA and MCAODC_03225 overlap by 4 nucleotides
MCAODC_03225 and rbsB are separated by 18 nucleotides
rbsB and ydaE are separated by 54 nucleotides
MCAODC_03215: MCAODC_03215 - hybrid sensor histidine kinase/response regulator, at 645,342 to 647,612
_03215
MCAODC_03220: rbsA - Ribose import ATP-binding protein RbsA, at 647,726 to 649,246
rbsA
MCAODC_03225: MCAODC_03225 - ribose ABC transporter permease, at 649,243 to 650,217
_03225
MCAODC_03230: rbsB - transcriptional regulator, at 650,236 to 651,177
rbsB
MCAODC_03235: ydaE - D-lyxose/D-mannose isomerase, at 651,232 to 651,915
ydaE
Group
Condition
MCAODC
_03215
MCAODC
_03220
MCAODC
_03225
MCAODC
_03230
MCAODC
_03235
rbsA
rbsB
ydaE
phage
WM_EV240
-0.1
-0.2
-0.0
-0.3
-0.2
phage
EV240
-0.1
-0.1
-0.2
-0.2
-0.0
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.3
-0.1
-0.0
phage
WM_EV240
-0.0
-0.0
+0.1
-0.3
-0.3
phage
EV240
-0.2
-0.0
-0.3
+0.3
-0.2
no phage control
Control_ECRC101_WM
+0.0
-0.2
-0.1
-0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.1
-0.1
-0.1
-0.1
-0.1
phage
WM_Bas09
-0.1
+0.0
-0.1
-0.0
-0.0
phage
WM_Bas09
-0.0
-0.1
-0.1
-0.1
+0.1
phage
Bas09
-0.1
+0.1
-0.1
+0.1
-0.1
phage
WM_RB68
-0.0
-0.1
-0.0
+0.0
-0.0
phage
WM_TP9
-0.1
-0.2
-0.0
-0.0
+0.3
phage
WM_Bas41
-0.2
-0.1
+0.2
-0.0
-0.0
carbon source
Sodium-DL-Lactate
-0.0
+0.1
+0.0
+0.0
-0.2
phage
Bas09
-0.1
-0.1
-0.0
+0.0
+0.1
phage
Bas14
-0.1
-0.1
+0.0
+0.2
-0.0
carbon source
L-Arabinose
-0.1
-0.1
+0.3
+0.1
-0.1
carbon source
D-Glucose
+0.1
+0.0
-0.0
+0.0
-0.1
carbon source
Casamino-acids
+0.1
-0.1
+0.0
-0.0
+0.1
phage
WM_TP9
-0.0
-0.2
+0.0
+0.1
+0.1
carbon source
L-Arabinose
+0.1
-0.1
+0.1
-0.0
-0.0
phage
Bas14
-0.0
+0.1
+0.0
-0.2
+0.2
phage
WM_Bas14
-0.1
+0.2
-0.0
+0.2
-0.1
carbon source
D-Glucose
-0.0
+0.1
+0.0
+0.0
+0.2
phage
TP9
+0.1
+0.1
-0.1
+0.2
+0.1
carbon source
Casamino-acids
+0.1
+0.1
+0.2
+0.1
-0.0
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