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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
proP and yjcZ are separated by 263 nucleotides
yjcZ and crfC overlap by 4 nucleotides
crfC and yjdM are separated by 401 nucleotides
yjdM and yjdN are separated by 258 nucleotides
MCAODC_03100: proP - glycine betaine/L-proline transporter ProP, at 627,612 to 629,114
proP
MCAODC_03105: yjcZ - Uncharacterized protein YjcZ, at 629,378 to 630,256
yjcZ
MCAODC_03110: crfC - clamp-binding protein CrfC, at 630,253 to 632,481
crfC
MCAODC_03115: yjdM - Protein YjdM, at 632,883 to 633,218
yjdM
MCAODC_03130: yjdN - VOC family metalloprotein YjdN, at 633,477 to 633,920
yjdN
Group
Condition
MCAODC
_03100
MCAODC
_03105
MCAODC
_03110
MCAODC
_03115
MCAODC
_03130
proP
yjcZ
crfC
yjdM
yjdN
carbon source
L-Arabinose
+0.0
-0.2
-0.1
-0.1
-0.2
phage
WM_RB68
-0.1
-0.2
-0.1
+0.1
-0.3
phage
WM_TP9
-0.1
-0.1
-0.1
-0.1
-0.1
no phage control
Control_ECRC101_WM
+0.0
+0.0
+0.1
-0.2
-0.4
phage
Bas14
-0.2
+0.0
-0.1
-0.3
+0.1
no phage control
Control_ECRC101_WM
-0.0
-0.1
-0.1
-0.2
-0.1
phage
Bas09
-0.2
-0.1
-0.2
-0.1
+0.1
phage
WM_Bas41
-0.1
-0.0
-0.1
-0.0
-0.2
carbon source
D-Glucose
+0.2
-0.3
-0.1
-0.1
-0.1
phage
WM_Bas09
+0.0
-0.0
+0.1
+0.1
-0.4
phage
EV240
-0.0
-0.1
-0.2
+0.2
-0.1
carbon source
L-Arabinose
-0.0
-0.1
-0.0
-0.2
+0.2
phage
Bas14
-0.3
-0.0
+0.1
-0.1
+0.1
phage
WM_TP9
-0.1
-0.2
+0.0
+0.2
-0.1
phage
WM_Bas14
-0.0
-0.2
+0.1
+0.1
-0.2
phage
WM_EV240
+0.2
-0.1
+0.1
-0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.0
+0.2
-0.0
carbon source
Casamino-acids
+0.1
-0.1
+0.0
+0.2
-0.2
carbon source
D-Glucose
-0.0
+0.0
+0.0
-0.1
+0.1
phage
WM_Bas09
-0.1
+0.1
+0.1
-0.1
+0.0
phage
EV240
+0.0
+0.0
-0.1
-0.2
+0.2
carbon source
Sodium-DL-Lactate
+0.0
+0.2
+0.1
-0.0
-0.2
phage
TP9
-0.1
+0.3
-0.1
+0.1
-0.1
phage
WM_EV240
+0.2
+0.0
-0.1
-0.1
+0.1
phage
Bas09
-0.1
-0.2
+0.1
+0.1
+0.2
carbon source
Casamino-acids
+0.1
-0.1
-0.1
+0.4
+0.0
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