Fitness for 5 genes in Escherichia coli ECRC101

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500 ntghoS and yjdJ are separated by 226 nucleotidesyjdJ and yjdI are separated by 11 nucleotidesyjdI and dcuS are separated by 180 nucleotidesdcuS and dcuR overlap by 4 nucleotides MCAODC_03005: ghoS - type V toxin-antitoxin system endoribonuclease antitoxin GhoS, at 606,735 to 607,031 ghoS MCAODC_03010: yjdJ - Uncharacterized protein YjdJ, at 607,258 to 607,530 yjdJ MCAODC_03015: yjdI - Uncharacterized protein YjdI, at 607,542 to 607,772 yjdI MCAODC_03020: dcuS - Sensor histidine kinase DcuS, at 607,953 to 609,584 dcuS MCAODC_03025: dcuR - two-component system response regulator DcuR, at 609,581 to 610,300 dcuR
Group Condition MCAODC_03005 MCAODC_03010 MCAODC_03015 MCAODC_03020 MCAODC_03025
ghoS yjdJ yjdI dcuS dcuR
phage TP9 -0.1 -1.6 -0.5 -0.2 -0.2
phage Bas14 +0.6 -2.0 -0.1 -0.2 -0.3
phage Bas09 -0.1 -1.2 +0.3 -0.1 -0.2
phage WM_Bas09 -0.0 -0.9 -0.2 +0.0 -0.1
carbon source Sodium-DL-Lactate +0.3 -1.0 -0.2 -0.1 -0.0
phage Bas14 +0.2 -0.9 +0.1 -0.2 -0.1
no phage control Control_ECRC101_WM +0.2 -0.8 -0.6 +0.2 +0.2
phage WM_EV240 -0.3 -0.4 +0.1 -0.2 -0.1
carbon source L-Arabinose -0.3 -0.3 -0.0 +0.0 -0.0
carbon source L-Arabinose +0.0 -0.6 -0.1 +0.2 -0.0
phage WM_Bas41 +0.2 -0.9 -0.0 +0.1 +0.1
carbon source D-Glucose +0.3 -0.5 +0.1 -0.0 -0.1
phage EV240 +0.1 -0.4 +0.9 -0.5 -0.3
phage Bas09 +0.2 +0.0 -0.0 -0.2 -0.1
phage WM_Bas14 +0.1 -0.9 +0.4 +0.1 +0.2
phage WM_TP9 +0.2 -0.9 +0.3 +0.1 +0.2
carbon source Casamino-acids +0.4 +0.1 +0.2 -0.3 -0.3
carbon source Sodium-DL-Lactate -0.0 +0.6 -0.3 -0.0 -0.1
phage EV240 -0.3 +1.1 -0.1 -0.2 -0.3
phage WM_EV240 +0.1 +0.5 -0.1 +0.0 -0.1
phage WM_Bas09 +0.1 +0.1 +0.3 +0.2 -0.1
no phage control Control_ECRC101_WM -0.2 +0.3 +0.1 +0.1 +0.2
phage WM_TP9 +0.3 +0.2 -0.1 +0.1 +0.1
carbon source Casamino-acids -0.1 +0.8 +0.6 -0.4 -0.1
phage WM_RB68 +0.2 +0.7 -0.0 -0.0 +0.1
carbon source D-Glucose +0.1 +0.6 +0.1 +0.1 +0.0
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