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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ghoS and yjdJ are separated by 226 nucleotides
yjdJ and yjdI are separated by 11 nucleotides
yjdI and dcuS are separated by 180 nucleotides
dcuS and dcuR overlap by 4 nucleotides
MCAODC_03005: ghoS - type V toxin-antitoxin system endoribonuclease antitoxin GhoS, at 606,735 to 607,031
ghoS
MCAODC_03010: yjdJ - Uncharacterized protein YjdJ, at 607,258 to 607,530
yjdJ
MCAODC_03015: yjdI - Uncharacterized protein YjdI, at 607,542 to 607,772
yjdI
MCAODC_03020: dcuS - Sensor histidine kinase DcuS, at 607,953 to 609,584
dcuS
MCAODC_03025: dcuR - two-component system response regulator DcuR, at 609,581 to 610,300
dcuR
Group
Condition
MCAODC
_03005
MCAODC
_03010
MCAODC
_03015
MCAODC
_03020
MCAODC
_03025
ghoS
yjdJ
yjdI
dcuS
dcuR
phage
TP9
-0.1
-1.6
-0.5
-0.2
-0.2
phage
Bas14
+0.6
-2.0
-0.1
-0.2
-0.3
phage
Bas09
-0.1
-1.2
+0.3
-0.1
-0.2
phage
WM_Bas09
-0.0
-0.9
-0.2
+0.0
-0.1
carbon source
Sodium-DL-Lactate
+0.3
-1.0
-0.2
-0.1
-0.0
phage
Bas14
+0.2
-0.9
+0.1
-0.2
-0.1
no phage control
Control_ECRC101_WM
+0.2
-0.8
-0.6
+0.2
+0.2
phage
WM_EV240
-0.3
-0.4
+0.1
-0.2
-0.1
carbon source
L-Arabinose
-0.3
-0.3
-0.0
+0.0
-0.0
carbon source
L-Arabinose
+0.0
-0.6
-0.1
+0.2
-0.0
phage
WM_Bas41
+0.2
-0.9
-0.0
+0.1
+0.1
carbon source
D-Glucose
+0.3
-0.5
+0.1
-0.0
-0.1
phage
EV240
+0.1
-0.4
+0.9
-0.5
-0.3
phage
Bas09
+0.2
+0.0
-0.0
-0.2
-0.1
phage
WM_Bas14
+0.1
-0.9
+0.4
+0.1
+0.2
phage
WM_TP9
+0.2
-0.9
+0.3
+0.1
+0.2
carbon source
Casamino-acids
+0.4
+0.1
+0.2
-0.3
-0.3
carbon source
Sodium-DL-Lactate
-0.0
+0.6
-0.3
-0.0
-0.1
phage
EV240
-0.3
+1.1
-0.1
-0.2
-0.3
phage
WM_EV240
+0.1
+0.5
-0.1
+0.0
-0.1
phage
WM_Bas09
+0.1
+0.1
+0.3
+0.2
-0.1
no phage control
Control_ECRC101_WM
-0.2
+0.3
+0.1
+0.1
+0.2
phage
WM_TP9
+0.3
+0.2
-0.1
+0.1
+0.1
carbon source
Casamino-acids
-0.1
+0.8
+0.6
-0.4
-0.1
phage
WM_RB68
+0.2
+0.7
-0.0
-0.0
+0.1
carbon source
D-Glucose
+0.1
+0.6
+0.1
+0.1
+0.0
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