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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
dcuA and cutA are separated by 115 nucleotides
cutA and dsbD overlap by 25 nucleotides
dsbD and yjdC are separated by 36 nucleotides
yjdC and Phe_trna are separated by 106 nucleotides
MCAODC_02950: dcuA - anaerobic C4-dicarboxylate transporter DcuA, at 592,841 to 594,142
dcuA
MCAODC_02955: cutA - divalent cation tolerance protein CutA, at 594,258 to 594,596
cutA
MCAODC_02960: dsbD - protein-disulfide reductase DsbD, at 594,572 to 596,269
dsbD
MCAODC_02965: yjdC - transcriptional regulator, at 596,306 to 596,881
yjdC
MCAODC_02970: Phe_trna - tRNA-Phe(gaa), at 596,988 to 597,063
_trna
Group
Condition
MCAODC
_02950
MCAODC
_02955
MCAODC
_02960
MCAODC
_02965
MCAODC
_02970
dcuA
cutA
dsbD
yjdC
Phe_trna
carbon source
L-Arabinose
+0.0
+0.2
-0.1
-0.4
N.D.
phage
WM_Bas09
-0.2
+0.2
+0.0
-0.3
N.D.
phage
Bas14
-0.0
-0.2
+0.1
-0.1
N.D.
no phage control
Control_ECRC101_WM
+0.0
+0.1
-0.1
-0.3
N.D.
phage
WM_TP9
+0.1
-0.0
-0.0
-0.1
N.D.
phage
WM_Bas41
+0.1
-0.0
+0.0
-0.3
N.D.
carbon source
D-Glucose
+0.0
-0.2
-0.0
+0.1
N.D.
phage
TP9
+0.1
-0.0
-0.0
-0.1
N.D.
phage
WM_TP9
+0.1
+0.1
-0.1
-0.2
N.D.
carbon source
Sodium-DL-Lactate
+0.1
-0.1
-0.1
+0.0
N.D.
carbon source
D-Glucose
+0.0
+0.1
-0.0
-0.1
N.D.
phage
WM_Bas14
+0.1
+0.2
-0.0
-0.3
N.D.
phage
WM_RB68
+0.1
+0.0
+0.0
-0.0
N.D.
phage
WM_Bas09
-0.1
-0.0
-0.0
+0.3
N.D.
carbon source
Sodium-DL-Lactate
+0.0
-0.0
-0.1
+0.2
N.D.
phage
Bas14
+0.0
+0.1
+0.0
+0.1
N.D.
carbon source
Casamino-acids
+0.3
+0.0
+0.0
-0.1
N.D.
phage
WM_EV240
-0.1
+0.3
+0.1
-0.0
N.D.
no phage control
Control_ECRC101_WM
-0.1
+0.1
-0.0
+0.3
N.D.
phage
Bas09
+0.2
+0.0
+0.1
+0.0
N.D.
carbon source
Casamino-acids
+0.3
+0.1
-0.0
+0.0
N.D.
phage
EV240
+0.1
+0.0
+0.5
+0.0
N.D.
phage
WM_EV240
+0.4
+0.1
+0.1
-0.1
N.D.
carbon source
L-Arabinose
+0.2
-0.1
-0.0
+0.5
N.D.
phage
Bas09
+0.4
+0.3
+0.2
-0.0
N.D.
phage
EV240
+0.1
+0.1
+0.3
+0.4
N.D.
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