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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ytfF and ytfE are separated by 107 nucleotides
ytfE and cycA are separated by 44 nucleotides
cycA and fklB are separated by 308 nucleotides
fklB and ytfB are separated by 217 nucleotides
MCAODC_02575: ytfF - Inner membrane protein YtfF, at 525,535 to 526,500
ytfF
MCAODC_02580: ytfE - iron-sulfur cluster repair protein YtfE, at 526,608 to 527,270
ytfE
MCAODC_02585: cycA - D-serine/D-alanine/glycine transporter, at 527,315 to 528,727
cycA
MCAODC_02590: fklB - FKBP-type peptidyl-prolyl cis-trans isomerase, at 529,036 to 529,656
fklB
MCAODC_02595: ytfB - cell division protein YtfB, at 529,874 to 530,512
ytfB
Group
Condition
MCAODC
_02575
MCAODC
_02580
MCAODC
_02585
MCAODC
_02590
MCAODC
_02595
ytfF
ytfE
cycA
fklB
ytfB
phage
EV240
-0.3
-0.0
-0.2
-0.6
+0.2
phage
Bas09
+0.1
-0.2
-0.1
-0.5
-0.1
phage
TP9
+0.0
-0.2
-0.2
-0.3
-0.2
phage
WM_EV240
-0.2
-0.1
-0.0
-0.1
-0.2
no phage control
Control_ECRC101_WM
-0.0
-0.2
-0.1
-0.0
-0.3
phage
Bas14
-0.3
-0.2
+0.1
+0.2
-0.3
phage
WM_Bas14
+0.0
-0.1
-0.0
-0.2
-0.0
no phage control
Control_ECRC101_WM
+0.1
-0.0
-0.1
-0.2
+0.0
phage
Bas09
+0.0
-0.0
+0.1
-0.3
-0.1
phage
WM_Bas41
-0.1
-0.3
-0.1
+0.2
-0.0
phage
WM_TP9
+0.1
-0.0
-0.2
-0.0
-0.1
carbon source
D-Glucose
-0.1
-0.0
-0.1
-0.1
+0.0
phage
EV240
-0.0
-0.1
-0.3
+0.2
-0.0
phage
Bas14
+0.0
-0.1
+0.1
-0.0
-0.2
phage
WM_TP9
-0.0
-0.1
+0.0
-0.1
+0.1
phage
WM_EV240
-0.1
+0.2
-0.2
+0.0
-0.0
carbon source
L-Arabinose
+0.2
-0.0
+0.0
-0.2
-0.1
phage
WM_RB68
-0.0
-0.2
-0.1
+0.1
+0.1
carbon source
Casamino-acids
+0.3
-0.1
-0.1
-0.1
-0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.2
+0.0
-0.3
-0.0
carbon source
Sodium-DL-Lactate
+0.3
+0.0
-0.0
-0.3
+0.1
carbon source
Casamino-acids
+0.0
-0.2
-0.1
+0.1
+0.3
phage
WM_Bas09
+0.0
+0.0
-0.0
+0.1
+0.1
carbon source
D-Glucose
-0.0
+0.2
-0.1
+0.2
+0.0
phage
WM_Bas09
+0.2
+0.0
+0.1
-0.1
-0.0
carbon source
L-Arabinose
-0.1
+0.1
+0.1
+0.3
+0.0
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