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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
ridA and pyrB are separated by 418 nucleotides
pyrB and pyrI are separated by 12 nucleotides
pyrI and ridA are separated by 72 nucleotides
ridA and mgtA are separated by 205 nucleotides
MCAODC_02365: ridA - Endoribonuclease L-PSP, at 485,335 to 485,730
ridA
MCAODC_02370: pyrB - aspartate carbamoyltransferase, at 486,149 to 487,084
pyrB
MCAODC_02375: pyrI - aspartate carbamoyltransferase regulatory subunit, at 487,097 to 487,558
pyrI
MCAODC_02380: ridA - 2-iminobutanoate/2-iminopropanoate deaminase, at 487,631 to 488,017
ridA
MCAODC_02385: mgtA - magnesium-translocating P-type ATPase, at 488,223 to 490,919
mgtA
Group
Condition
MCAODC
_02365
MCAODC
_02370
MCAODC
_02375
MCAODC
_02380
MCAODC
_02385
ridA
pyrB
pyrI
ridA
mgtA
carbon source
D-Glucose
-0.2
-7.0
-0.8
-0.2
-0.1
carbon source
D-Glucose
-0.1
-5.8
-0.7
-0.5
-0.0
carbon source
Sodium-DL-Lactate
+0.2
-5.6
-0.1
-0.1
-0.4
carbon source
Sodium-DL-Lactate
-0.1
-5.4
-0.1
-0.0
-0.3
carbon source
L-Arabinose
-0.0
-3.7
-0.4
-0.4
+0.1
carbon source
Casamino-acids
+0.3
-4.4
+0.0
+0.0
-0.1
phage
EV240
+0.2
-0.1
-0.2
-2.9
-0.8
phage
EV240
+0.3
-0.1
+0.2
-2.9
-0.8
carbon source
Casamino-acids
+0.3
-3.6
+0.2
-0.1
-0.1
carbon source
L-Arabinose
-0.0
-2.8
-0.7
+0.4
+0.1
phage
WM_EV240
-0.1
-0.8
-0.6
-0.3
-0.4
phage
WM_EV240
+0.1
-0.5
-0.3
-0.4
-0.2
phage
Bas09
-0.0
+0.0
-0.0
-0.4
-0.7
no phage control
Control_ECRC101_WM
-0.2
-0.1
-0.4
+0.0
-0.1
phage
Bas14
+0.3
-0.2
+0.1
-0.8
-0.1
phage
WM_Bas09
-0.0
+0.1
-0.2
-0.2
-0.1
phage
TP9
-0.0
-0.3
+0.1
+0.0
+0.0
phage
WM_Bas41
+0.1
-0.2
+0.1
-0.0
-0.2
no phage control
Control_ECRC101_WM
-0.1
-0.0
-0.0
-0.0
-0.1
phage
Bas14
+0.3
+0.1
-0.2
-0.4
-0.0
phage
WM_TP9
-0.0
-0.1
-0.2
+0.1
+0.0
phage
WM_TP9
+0.1
-0.1
-0.1
+0.0
+0.1
phage
WM_Bas14
+0.1
-0.3
+0.1
+0.1
-0.0
phage
WM_RB68
+0.2
+0.0
-0.3
+0.2
-0.1
phage
Bas09
-0.1
+0.1
+0.2
+0.4
-0.5
phage
WM_Bas09
-0.1
+0.3
-0.2
+0.3
-0.1
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