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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
bdcR and bdcA are separated by 70 nucleotides
bdcA and ridA are separated by 130 nucleotides
ridA and pyrB are separated by 418 nucleotides
pyrB and pyrI are separated by 12 nucleotides
MCAODC_02355: bdcR - HTH-type transcriptional repressor BdcR, at 483,827 to 484,420
bdcR
MCAODC_02360: bdcA - SDR family oxidoreductase, at 484,491 to 485,204
bdcA
MCAODC_02365: ridA - Endoribonuclease L-PSP, at 485,335 to 485,730
ridA
MCAODC_02370: pyrB - aspartate carbamoyltransferase, at 486,149 to 487,084
pyrB
MCAODC_02375: pyrI - aspartate carbamoyltransferase regulatory subunit, at 487,097 to 487,558
pyrI
Group
Condition
MCAODC
_02355
MCAODC
_02360
MCAODC
_02365
MCAODC
_02370
MCAODC
_02375
bdcR
bdcA
ridA
pyrB
pyrI
carbon source
D-Glucose
-0.1
-0.0
-0.2
-7.0
-0.8
carbon source
D-Glucose
-0.0
+0.2
-0.1
-5.8
-0.7
carbon source
Sodium-DL-Lactate
+0.0
-0.1
+0.2
-5.6
-0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.0
-0.1
-5.4
-0.1
carbon source
L-Arabinose
+0.1
-0.2
-0.0
-3.7
-0.4
carbon source
Casamino-acids
-0.1
+0.2
+0.3
-4.4
+0.0
carbon source
L-Arabinose
+0.3
-0.1
-0.0
-2.8
-0.7
carbon source
Casamino-acids
+0.2
+0.0
+0.3
-3.6
+0.2
phage
WM_EV240
-0.0
-0.1
-0.1
-0.8
-0.6
phage
WM_EV240
+0.1
-0.3
+0.1
-0.5
-0.3
phage
WM_TP9
-0.3
-0.0
-0.0
-0.1
-0.2
no phage control
Control_ECRC101_WM
+0.1
+0.2
-0.2
-0.1
-0.4
phage
WM_Bas14
-0.3
+0.0
+0.1
-0.3
+0.1
phage
WM_TP9
+0.0
-0.2
+0.1
-0.1
-0.1
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.1
-0.0
-0.0
phage
WM_Bas09
-0.1
+0.0
-0.0
+0.1
-0.2
phage
WM_Bas41
-0.1
-0.1
+0.1
-0.2
+0.1
phage
TP9
+0.0
-0.0
-0.0
-0.3
+0.1
phage
EV240
-0.1
-0.0
+0.2
-0.1
-0.2
phage
WM_RB68
-0.0
-0.0
+0.2
+0.0
-0.3
phage
Bas14
-0.2
-0.1
+0.3
+0.1
-0.2
phage
Bas09
-0.1
+0.0
-0.1
+0.1
+0.2
phage
Bas14
+0.1
-0.2
+0.3
-0.2
+0.1
phage
WM_Bas09
+0.1
+0.0
-0.1
+0.3
-0.2
phage
Bas09
+0.2
+0.1
-0.0
+0.0
-0.0
phage
EV240
+0.1
+0.1
+0.3
-0.1
+0.2
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MCAODC_02365
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