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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
lptF and pepA are separated by 266 nucleotides
pepA and holC are separated by 353 nucleotides
holC and valS overlap by 1 nucleotides
valS and yjgN are separated by 54 nucleotides
MCAODC_02290: lptF - LPS export ABC transporter permease LptF, at 471,209 to 472,309
lptF
MCAODC_02295: pepA - leucyl aminopeptidase, at 472,576 to 474,087
pepA
MCAODC_02315: holC - DNA polymerase III subunit chi, at 474,441 to 474,884
holC
MCAODC_02320: valS - valine--tRNA ligase, at 474,884 to 477,739
valS
MCAODC_02325: yjgN - Inner membrane protein YjgN, at 477,794 to 478,990
yjgN
Group
Condition
MCAODC
_02290
MCAODC
_02295
MCAODC
_02315
MCAODC
_02320
MCAODC
_02325
lptF
pepA
holC
valS
yjgN
phage
WM_EV240
N.D.
-0.1
-0.8
N.D.
-0.4
phage
Bas09
N.D.
-0.4
-0.5
N.D.
-0.2
phage
Bas14
N.D.
-0.5
-0.3
N.D.
-0.3
carbon source
D-Glucose
N.D.
+0.0
-1.1
N.D.
-0.0
carbon source
L-Arabinose
N.D.
-0.0
-0.9
N.D.
-0.2
phage
EV240
N.D.
-0.3
-0.3
N.D.
-0.5
phage
Bas14
N.D.
-0.5
+0.0
N.D.
-0.5
phage
WM_Bas09
N.D.
-0.1
-0.4
N.D.
-0.4
phage
WM_Bas09
N.D.
-0.2
-0.0
N.D.
-0.7
no phage control
Control_ECRC101_WM
N.D.
-0.3
-0.1
N.D.
-0.5
carbon source
D-Glucose
N.D.
-0.1
-0.7
N.D.
-0.1
carbon source
Sodium-DL-Lactate
N.D.
-0.4
-0.8
N.D.
+0.3
phage
WM_Bas14
N.D.
-0.3
-0.3
N.D.
-0.2
carbon source
Casamino-acids
N.D.
-0.1
-0.7
N.D.
-0.0
carbon source
Casamino-acids
N.D.
-0.1
-0.7
N.D.
+0.0
carbon source
Sodium-DL-Lactate
N.D.
+0.0
-0.8
N.D.
+0.1
phage
TP9
N.D.
-0.3
-0.1
N.D.
-0.3
phage
WM_RB68
N.D.
-0.1
-0.3
N.D.
-0.1
phage
WM_TP9
N.D.
-0.0
-0.5
N.D.
+0.1
carbon source
L-Arabinose
N.D.
+0.1
-0.6
N.D.
+0.1
phage
EV240
N.D.
-0.1
-0.3
N.D.
+0.2
no phage control
Control_ECRC101_WM
N.D.
+0.4
-0.0
N.D.
-0.5
phage
WM_EV240
N.D.
-0.0
-0.4
N.D.
+0.4
phage
Bas09
N.D.
-0.4
-0.1
N.D.
+0.5
phage
WM_Bas41
N.D.
-0.1
+0.3
N.D.
-0.1
phage
WM_TP9
N.D.
-0.2
-0.0
N.D.
+0.7
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