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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
fimE and fimB are separated by 477 nucleotides
fimB and nanC are separated by 1455 nucleotides
nanC and nanM are separated by 19 nucleotides
nanM and nanS are separated by 64 nucleotides
MCAODC_02125: fimE - type 1 fimbria switch DNA invertase FimE, at 418,076 to 418,672
fimE
MCAODC_02130: fimB - type 1 fimbria switch DNA invertase FimB, at 419,150 to 419,752
fimB
MCAODC_02135: nanC - N-acetylneuraminic acid outer membrane channel NanC, at 421,208 to 421,924
nanC
MCAODC_02140: nanM - N-acetylneuraminate epimerase, at 421,944 to 423,050
nanM
MCAODC_02145: nanS - putative 9-O-acetyl-N-acetylneuraminic acid deacetylase, at 423,115 to 424,095
nanS
Group
Condition
MCAODC
_02125
MCAODC
_02130
MCAODC
_02135
MCAODC
_02140
MCAODC
_02145
fimE
fimB
nanC
nanM
nanS
phage
WM_Bas41
-0.6
-0.2
-0.2
-0.1
-0.1
no phage control
Control_ECRC101_WM
+0.0
-0.4
-0.2
-0.2
+0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.2
-0.1
+0.1
-0.2
phage
WM_EV240
+0.2
-0.2
-0.5
-0.2
+0.2
no phage control
Control_ECRC101_WM
+0.2
-0.5
+0.1
-0.4
+0.1
carbon source
Casamino-acids
-0.2
-0.0
+0.3
-0.3
-0.2
phage
WM_TP9
-0.1
-0.0
-0.0
-0.1
+0.1
phage
Bas14
-0.2
-0.2
+0.1
-0.2
+0.2
phage
WM_EV240
+0.1
-0.0
-0.1
-0.2
-0.1
phage
WM_RB68
-0.0
-0.3
-0.0
+0.0
+0.1
phage
TP9
+0.1
-0.2
+0.0
+0.0
-0.1
phage
WM_Bas09
-0.1
-0.1
-0.1
+0.2
+0.0
phage
WM_Bas09
+0.1
-0.1
-0.1
-0.2
+0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.2
+0.2
-0.0
carbon source
L-Arabinose
+0.1
+0.3
-0.4
+0.0
-0.1
phage
Bas14
-0.1
-0.2
+0.2
-0.0
+0.2
carbon source
D-Glucose
+0.3
-0.1
+0.1
+0.1
-0.1
phage
Bas09
-0.3
+0.3
-0.0
+0.0
+0.1
carbon source
L-Arabinose
+0.3
-0.1
-0.1
+0.2
-0.0
phage
WM_TP9
+0.0
+0.4
+0.1
-0.2
-0.0
phage
WM_Bas14
+0.1
-0.0
+0.1
+0.2
-0.0
phage
Bas09
+0.1
-0.3
+0.1
+0.4
+0.1
phage
EV240
+0.2
-0.0
+0.2
+0.2
-0.1
carbon source
Casamino-acids
+0.1
+0.1
+0.3
-0.0
+0.1
phage
EV240
+0.0
+0.3
+0.3
+0.1
+0.0
carbon source
D-Glucose
+0.4
+0.5
+0.0
+0.1
+0.0
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