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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
fimA and fimA are separated by 157 nucleotides
fimA and fimE are separated by 464 nucleotides
fimE and fimB are separated by 477 nucleotides
fimB and nanC are separated by 1455 nucleotides
MCAODC_02115: fimA - Pilin (type 1 fimbrial protein), at 416,459 to 416,905
fimA
MCAODC_02120: fimA - Type-1 fimbrial protein, A chain precursor, at 417,063 to 417,611
fimA
MCAODC_02125: fimE - type 1 fimbria switch DNA invertase FimE, at 418,076 to 418,672
fimE
MCAODC_02130: fimB - type 1 fimbria switch DNA invertase FimB, at 419,150 to 419,752
fimB
MCAODC_02135: nanC - N-acetylneuraminic acid outer membrane channel NanC, at 421,208 to 421,924
nanC
Group
Condition
MCAODC
_02115
MCAODC
_02120
MCAODC
_02125
MCAODC
_02130
MCAODC
_02135
fimA
fimA
fimE
fimB
nanC
phage
WM_Bas41
+0.2
-0.2
-0.6
-0.2
-0.2
no phage control
Control_ECRC101_WM
-0.4
+0.0
+0.0
-0.4
-0.2
phage
WM_Bas09
-0.5
+0.1
+0.1
-0.1
-0.1
phage
WM_EV240
-0.6
+0.1
+0.1
-0.0
-0.1
phage
Bas14
+0.1
-0.4
-0.1
-0.2
+0.2
phage
WM_Bas09
-0.3
+0.3
-0.1
-0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.2
+0.1
-0.1
+0.1
-0.2
carbon source
D-Glucose
-0.2
-0.3
+0.3
-0.1
+0.1
phage
Bas09
-0.3
+0.3
+0.1
-0.3
+0.1
phage
Bas14
+0.2
-0.2
-0.2
-0.2
+0.1
phage
WM_RB68
+0.3
-0.1
-0.0
-0.3
-0.0
no phage control
Control_ECRC101_WM
-0.1
+0.2
+0.2
-0.5
+0.1
phage
WM_TP9
-0.3
-0.2
+0.0
+0.4
+0.1
carbon source
Sodium-DL-Lactate
+0.2
+0.3
-0.2
-0.2
-0.1
carbon source
L-Arabinose
-0.3
+0.2
+0.1
+0.3
-0.4
phage
TP9
+0.3
-0.2
+0.1
-0.2
+0.0
phage
WM_EV240
+0.2
+0.5
+0.2
-0.2
-0.5
phage
WM_Bas14
-0.2
+0.3
+0.1
-0.0
+0.1
carbon source
Casamino-acids
-0.3
-0.1
+0.1
+0.1
+0.3
carbon source
Casamino-acids
+0.1
+0.0
-0.2
-0.0
+0.3
phage
WM_TP9
+0.2
+0.2
-0.1
-0.0
-0.0
carbon source
L-Arabinose
+0.3
+0.1
+0.3
-0.1
-0.1
phage
EV240
+0.0
+0.1
+0.2
-0.0
+0.2
phage
EV240
-0.3
+0.4
+0.0
+0.3
+0.3
carbon source
D-Glucose
-0.4
+0.3
+0.4
+0.5
+0.0
phage
Bas09
+0.5
+0.4
-0.3
+0.3
-0.0
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