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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
iadA and iadA are separated by 12 nucleotides
iadA and hypT are separated by 247 nucleotides
hypT and iraD overlap by 8 nucleotides
iraD and idlP overlap by 4 nucleotides
MCAODC_02035: iadA - beta-aspartyl-peptidase, at 400,795 to 401,256
iadA
MCAODC_02040: iadA - beta-aspartyl-peptidase, at 401,269 to 402,441
iadA
MCAODC_02045: hypT - hypochlorite stress DNA-binding transcriptional regulator HypT, at 402,689 to 403,417
hypT
MCAODC_02050: iraD - anti-adapter protein IraD, at 403,410 to 403,802
iraD
MCAODC_02055: idlP - iraD leader peptide, at 403,799 to 403,882
idlP
Group
Condition
MCAODC
_02035
MCAODC
_02040
MCAODC
_02045
MCAODC
_02050
MCAODC
_02055
iadA
iadA
hypT
iraD
idlP
phage
EV240
-0.3
+0.0
-0.6
-0.2
-1.1
phage
Bas14
-0.1
+0.1
-0.6
-0.1
-0.5
carbon source
Sodium-DL-Lactate
-0.2
-0.1
-0.1
+0.1
-0.5
phage
Bas09
-0.1
-0.0
-0.2
+0.1
-0.5
phage
TP9
+0.1
+0.0
-0.6
-0.0
-0.2
phage
Bas14
+0.1
+0.3
-0.5
+0.0
-0.5
phage
EV240
+0.2
-0.2
-0.3
+0.0
-0.4
carbon source
Casamino-acids
-0.1
-0.1
-0.3
+0.2
-0.2
no phage control
Control_ECRC101_WM
+0.2
-0.0
-0.1
+0.0
-0.4
carbon source
Casamino-acids
+0.0
+0.0
-0.6
+0.4
-0.2
carbon source
L-Arabinose
+0.3
-0.0
+0.3
-0.3
-0.4
phage
WM_RB68
-0.1
+0.0
+0.2
-0.4
+0.1
phage
WM_EV240
-0.6
+0.1
-0.3
+0.4
+0.5
phage
WM_Bas09
+0.0
+0.1
+0.0
-0.1
+0.1
phage
Bas09
+0.2
-0.1
-0.1
+0.4
-0.4
phage
WM_Bas09
-0.0
-0.0
+0.3
-0.2
+0.1
carbon source
D-Glucose
+0.4
-0.1
-0.0
+0.1
-0.3
carbon source
D-Glucose
+0.0
-0.0
-0.0
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.2
+0.1
+0.0
+0.3
phage
WM_Bas41
+0.3
-0.1
+0.6
-0.4
-0.2
phage
WM_Bas14
+0.5
+0.1
+0.1
-0.4
-0.1
phage
WM_TP9
+0.3
+0.1
-0.1
+0.2
-0.0
phage
WM_TP9
+0.4
+0.2
-0.1
+0.0
+0.0
phage
WM_EV240
+0.2
-0.0
+0.1
+0.1
+0.2
carbon source
L-Arabinose
+0.0
-0.1
+0.2
+0.0
+0.6
no phage control
Control_ECRC101_WM
+0.3
+0.0
+0.4
-0.1
+0.3
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MCAODC_02045
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