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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
gmrSD and hsdR are separated by 277 nucleotides
hsdR and hsdM are separated by 66 nucleotides
hsdM and hsdS overlap by 1 nucleotides
hsdS and symE are separated by 220 nucleotides
MCAODC_01920: gmrSD - DUF262 domain-containing protein, at 371,504 to 371,788
gmrSD
MCAODC_01925: hsdR - DEAD/DEAH box helicase, at 372,066 to 374,498
hsdR
MCAODC_01930: hsdM - Type I restriction enzyme EcoEI methylase subunit, at 374,565 to 376,034
hsdM
MCAODC_01935: hsdS - restriction endonuclease subunit S, at 376,034 to 377,788
hsdS
MCAODC_01945: symE - endoribonuclease SymE, at 378,009 to 378,350
symE
Group
Condition
MCAODC
_01920
MCAODC
_01925
MCAODC
_01930
MCAODC
_01935
MCAODC
_01945
gmrSD
hsdR
hsdM
hsdS
symE
phage
Bas09
-0.2
-0.3
-0.1
-0.2
-0.5
phage
Bas14
-1.2
+0.0
-0.1
+0.4
-0.4
phage
WM_Bas14
-0.6
-0.1
-0.0
-0.2
-0.1
phage
TP9
-0.3
+0.1
-0.2
-0.0
-0.4
phage
WM_RB68
-0.1
-0.0
-0.0
-0.2
-0.3
carbon source
Casamino-acids
-1.3
-0.0
+0.3
+0.5
+0.1
carbon source
D-Glucose
-0.2
+0.0
+0.0
+0.1
-0.4
phage
EV240
-0.4
+0.0
-0.2
+0.2
+0.1
phage
WM_Bas09
-0.3
+0.1
+0.0
-0.1
+0.1
phage
WM_Bas41
-0.7
-0.1
-0.2
+0.1
+0.6
carbon source
Sodium-DL-Lactate
-0.0
+0.0
+0.0
+0.1
-0.4
carbon source
D-Glucose
-0.4
+0.0
+0.1
+0.1
-0.0
phage
Bas09
+0.1
+0.1
-0.3
-0.0
+0.0
carbon source
L-Arabinose
-0.3
+0.1
+0.0
+0.0
-0.1
no phage control
Control_ECRC101_WM
+0.1
-0.1
-0.1
-0.2
+0.2
phage
WM_EV240
+0.3
-0.2
-0.1
+0.2
-0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.0
-0.1
+0.2
-0.0
phage
WM_TP9
-0.3
-0.0
-0.0
-0.1
+0.4
carbon source
Casamino-acids
-0.0
+0.0
+0.1
+0.1
-0.1
phage
WM_TP9
+0.6
-0.0
-0.2
-0.0
-0.3
phage
WM_EV240
+0.7
-0.1
-0.0
-0.3
-0.2
no phage control
Control_ECRC101_WM
+0.2
-0.0
+0.1
+0.0
+0.1
phage
EV240
-0.0
+0.2
-0.1
+0.3
+0.1
phage
Bas14
+0.4
+0.0
-0.0
+0.1
-0.0
phage
WM_Bas09
-0.0
+0.0
-0.0
+0.2
+0.4
carbon source
L-Arabinose
+0.4
+0.1
-0.1
+0.3
+0.3
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