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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
deoA and deoC are separated by 126 nucleotides
deoC and yjjI are separated by 257 nucleotides
yjjI and MCAODC_01755 are separated by 35 nucleotides
MCAODC_01755 and yjjW overlap by 29 nucleotides
MCAODC_01740: deoA - thymidine phosphorylase, at 338,248 to 339,570
deoA
MCAODC_01745: deoC - deoxyribose-phosphate aldolase, at 339,697 to 340,476
deoC
MCAODC_01750: yjjI - Glycine radical enzyme, YjjI family, at 340,734 to 342,002
yjjI
MCAODC_01755: MCAODC_01755 - Glycine radical enzyme, YjjI family, at 342,038 to 342,283
_01755
MCAODC_01760: yjjW - Putative glycyl-radical enzyme activating enzyme YjjW, at 342,255 to 343,118
yjjW
Group
Condition
MCAODC
_01740
MCAODC
_01745
MCAODC
_01750
MCAODC
_01755
MCAODC
_01760
deoA
deoC
yjjI
yjjW
phage
WM_EV240
+0.0
-1.0
-0.1
+0.1
-0.0
phage
EV240
+0.0
-0.1
-0.2
-0.4
-0.3
carbon source
D-Glucose
+0.1
-0.1
-0.1
-0.2
-0.4
phage
Bas09
+0.1
-0.1
-0.1
-0.4
-0.2
phage
TP9
-0.2
+0.5
-0.1
-0.5
-0.2
phage
WM_Bas09
+0.0
-0.6
-0.1
+0.1
+0.2
phage
Bas14
+0.0
-0.4
+0.1
+0.0
-0.1
phage
EV240
-0.3
-0.0
+0.4
-0.3
-0.0
phage
Bas09
-0.1
-0.1
+0.3
-0.2
+0.1
phage
WM_RB68
+0.1
-0.3
+0.0
-0.1
+0.2
no phage control
Control_ECRC101_WM
-0.1
-0.1
-0.0
+0.2
+0.1
phage
WM_TP9
-0.0
-0.3
-0.2
+0.3
+0.4
phage
WM_Bas09
+0.2
-0.3
-0.1
+0.0
+0.2
phage
WM_TP9
+0.1
+0.0
+0.1
+0.1
-0.1
no phage control
Control_ECRC101_WM
+0.1
-0.0
-0.2
-0.0
+0.3
phage
WM_Bas41
+0.2
+0.0
-0.2
+0.1
+0.3
carbon source
D-Glucose
+0.4
-0.1
+0.0
-0.1
+0.1
phage
WM_EV240
+0.2
+0.1
-0.2
+0.2
-0.0
carbon source
Casamino-acids
+0.1
+0.0
+0.1
+0.2
-0.0
phage
WM_Bas14
-0.1
+0.0
+0.1
+0.1
+0.4
carbon source
Casamino-acids
+0.4
+0.1
+0.2
-0.0
-0.2
phage
Bas14
+0.2
+0.2
+0.0
-0.0
+0.2
carbon source
Sodium-DL-Lactate
+0.4
+0.1
-0.0
-0.0
+0.2
carbon source
L-Arabinose
+0.5
+0.1
+0.0
+0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.4
+0.3
+0.1
+0.1
+0.1
carbon source
L-Arabinose
+0.4
+0.5
+0.1
+0.2
+0.1
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MCAODC_01750
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