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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
serB and lplA are separated by 105 nucleotides
lplA and MCAODC_01725 are separated by 31 nucleotides
MCAODC_01725 and deoD are separated by 160 nucleotides
deoD and deoB are separated by 56 nucleotides
MCAODC_01715: serB - phosphoserine phosphatase, at 332,979 to 333,947
serB
MCAODC_01720: lplA - YtjB family periplasmic protein, at 334,053 to 335,741
lplA
MCAODC_01725: MCAODC_01725 - transcriptional regulator, at 335,773 to 336,036
_01725
MCAODC_01730: deoD - purine-nucleoside phosphorylase, at 336,197 to 336,916
deoD
MCAODC_01735: deoB - phosphopentomutase, at 336,973 to 338,196
deoB
Group
Condition
MCAODC
_01715
MCAODC
_01720
MCAODC
_01725
MCAODC
_01730
MCAODC
_01735
serB
lplA
deoD
deoB
carbon source
Sodium-DL-Lactate
-6.6
+0.0
-0.0
-0.0
+0.2
carbon source
L-Arabinose
-6.5
-0.1
-0.1
-0.0
+0.3
carbon source
L-Arabinose
-6.6
-0.1
+0.2
-0.0
+0.3
carbon source
D-Glucose
-5.5
+0.2
+0.1
-0.4
-0.2
carbon source
Sodium-DL-Lactate
-5.4
-0.1
-0.3
+0.2
-0.0
carbon source
D-Glucose
-5.7
-0.2
+0.1
+0.4
+0.0
phage
WM_TP9
-4.9
+0.2
-0.0
-0.4
-0.1
phage
WM_TP9
-4.6
-0.0
-0.2
-0.2
+0.1
no phage control
Control_ECRC101_WM
-4.0
+0.1
-0.3
-0.1
+0.0
phage
WM_Bas41
-3.4
+0.1
+0.1
-0.4
-0.3
phage
WM_EV240
-3.4
-0.2
-0.0
+0.2
-0.5
no phage control
Control_ECRC101_WM
-3.4
+0.0
+0.0
+0.1
-0.3
phage
WM_Bas09
-3.6
+0.2
-0.1
-0.1
+0.1
phage
WM_EV240
-2.4
-0.2
-0.3
+0.4
-0.8
phage
WM_RB68
-2.1
+0.1
-0.5
-0.5
+0.1
phage
WM_Bas09
-2.4
+0.2
+0.1
-0.3
-0.2
phage
WM_Bas14
-2.7
+0.2
+0.3
-0.1
-0.1
phage
Bas09
-0.1
-0.0
-0.0
-0.2
-0.7
phage
EV240
-0.0
-0.2
-0.1
+0.2
-1.0
phage
TP9
-0.4
-0.0
+0.3
-0.4
-0.5
carbon source
Casamino-acids
-0.3
-0.2
-0.3
-0.4
+0.3
phage
Bas14
-0.1
-0.1
-0.0
-0.3
+0.1
phage
Bas09
-0.0
-0.3
+0.1
-0.1
-0.1
phage
EV240
+0.3
-0.3
+0.2
+0.3
-0.7
phage
Bas14
-0.3
+0.1
-0.0
+0.5
-0.3
carbon source
Casamino-acids
-0.2
+0.2
+0.3
+0.1
+0.4
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