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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
fixX and fixB are separated by 50 nucleotides
fixB and fixA are separated by 14 nucleotides
fixA and caiT are separated by 473 nucleotides
caiT and caiA are separated by 30 nucleotides
MCAODC_01400: fixX - ferredoxin-like protein FixX, at 267,316 to 268,602
fixX
MCAODC_01405: fixB - electron transfer flavoprotein subunit alpha/FixB family protein, at 268,653 to 269,594
fixB
MCAODC_01410: fixA - Protein FixA, at 269,609 to 270,379
fixA
MCAODC_01415: caiT - L-carnitine/gamma-butyrobetaine antiporter, at 270,853 to 272,367
caiT
MCAODC_01420: caiA - crotonobetainyl-CoA dehydrogenase, at 272,398 to 273,540
caiA
Group
Condition
MCAODC
_01400
MCAODC
_01405
MCAODC
_01410
MCAODC
_01415
MCAODC
_01420
fixX
fixB
fixA
caiT
caiA
carbon source
Casamino-acids
-0.1
-0.3
-0.2
+0.2
+0.1
phage
EV240
-0.5
-0.0
+0.1
-0.0
+0.1
phage
TP9
-0.1
+0.0
-0.2
+0.0
-0.0
phage
WM_RB68
-0.2
-0.1
+0.1
-0.0
-0.0
phage
WM_EV240
-0.1
-0.2
+0.1
-0.0
+0.1
phage
Bas09
+0.1
-0.2
-0.0
-0.0
-0.0
carbon source
D-Glucose
+0.2
-0.1
-0.1
-0.1
-0.0
no phage control
Control_ECRC101_WM
-0.0
-0.0
-0.1
+0.0
+0.0
phage
WM_TP9
-0.1
-0.1
+0.1
-0.0
-0.0
phage
WM_Bas09
-0.1
-0.2
+0.2
-0.1
+0.0
phage
WM_Bas41
+0.0
-0.1
+0.2
-0.1
-0.0
phage
EV240
-0.2
-0.1
-0.1
+0.0
+0.3
phage
WM_TP9
+0.2
-0.1
+0.0
-0.0
+0.0
phage
WM_EV240
-0.1
-0.1
+0.4
-0.2
-0.0
no phage control
Control_ECRC101_WM
+0.1
-0.0
-0.0
+0.0
-0.1
phage
Bas14
+0.1
-0.1
-0.1
+0.1
-0.0
phage
Bas09
-0.2
+0.1
+0.3
-0.3
+0.1
phage
Bas14
+0.0
+0.0
+0.1
-0.0
+0.0
carbon source
L-Arabinose
+0.1
+0.1
-0.0
-0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.2
-0.0
+0.0
+0.1
carbon source
D-Glucose
+0.1
+0.0
+0.1
-0.0
+0.0
carbon source
L-Arabinose
+0.0
-0.1
+0.2
-0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.1
-0.0
+0.2
-0.1
+0.1
phage
WM_Bas09
-0.0
+0.1
+0.2
+0.1
+0.0
carbon source
Casamino-acids
+0.1
-0.1
+0.2
+0.1
+0.1
phage
WM_Bas14
+0.1
+0.2
+0.2
-0.1
+0.0
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