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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
kefF and yaaU are separated by 107 nucleotides
yaaU and fixX are separated by 57 nucleotides
fixX and fixX overlap by 4 nucleotides
fixX and fixB are separated by 50 nucleotides
MCAODC_01385: kefF - glutathione-regulated potassium-efflux system oxidoreductase KefF, at 265,005 to 265,535
kefF
MCAODC_01390: yaaU - Putative metabolite transport protein YaaU, at 265,643 to 266,974
yaaU
MCAODC_01395: fixX - ferredoxin-like protein FixX, at 267,032 to 267,319
fixX
MCAODC_01400: fixX - ferredoxin-like protein FixX, at 267,316 to 268,602
fixX
MCAODC_01405: fixB - electron transfer flavoprotein subunit alpha/FixB family protein, at 268,653 to 269,594
fixB
Group
Condition
MCAODC
_01385
MCAODC
_01390
MCAODC
_01395
MCAODC
_01400
MCAODC
_01405
kefF
yaaU
fixX
fixX
fixB
carbon source
Casamino-acids
-0.3
-0.1
-0.6
-0.1
-0.3
phage
Bas14
-0.9
-0.2
-0.0
+0.0
+0.0
carbon source
D-Glucose
-0.1
-0.1
-0.8
+0.1
+0.0
carbon source
L-Arabinose
+0.0
-0.1
-0.8
+0.1
+0.1
phage
WM_EV240
+0.2
-0.2
-0.4
-0.1
-0.1
no phage control
Control_ECRC101_WM
-0.3
-0.1
-0.1
+0.1
-0.0
phage
EV240
-0.2
+0.0
+0.3
-0.5
-0.0
phage
WM_Bas09
-0.1
-0.2
+0.2
-0.1
-0.2
phage
TP9
-0.4
-0.1
+0.3
-0.1
+0.0
carbon source
Sodium-DL-Lactate
-0.2
-0.1
+0.0
-0.1
+0.2
phage
Bas09
+0.0
-0.0
-0.2
-0.2
+0.1
phage
WM_RB68
+0.0
+0.1
+0.0
-0.2
-0.1
phage
WM_EV240
+0.1
-0.2
+0.3
-0.1
-0.2
carbon source
L-Arabinose
+0.1
+0.2
-0.2
+0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.1
-0.1
+0.1
-0.0
phage
WM_TP9
-0.2
-0.1
+0.1
+0.2
-0.1
phage
Bas09
-0.2
+0.0
+0.2
+0.1
-0.2
phage
WM_TP9
+0.4
-0.0
-0.2
-0.1
-0.1
phage
WM_Bas41
+0.2
-0.3
+0.1
+0.0
-0.1
carbon source
D-Glucose
+0.2
+0.0
-0.2
+0.2
-0.1
phage
EV240
-0.1
+0.1
+0.4
-0.2
-0.1
phage
Bas14
-0.2
-0.0
+0.5
+0.1
-0.1
no phage control
Control_ECRC101_WM
+0.1
+0.0
+0.2
-0.0
-0.0
carbon source
Casamino-acids
+0.2
-0.2
+0.2
+0.1
-0.1
phage
WM_Bas09
+0.4
+0.1
-0.2
-0.0
+0.1
phage
WM_Bas14
+0.1
-0.2
+0.2
+0.1
+0.2
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