Fitness for 5 genes in Escherichia coli ECRC101

Add gene:

Number of genes on each side:  

Top 26 experiments (either direction), sorted by average fitness

Or view all 26 experiments or choose conditions or try the comparative fitness browser

500 ntespY1 and djlA are separated by 294 nucleotidesdjlA and lptD are separated by 254 nucleotideslptD and surA are separated by 52 nucleotidessurA and pdxA overlap by 1 nucleotides MCAODC_01325: espY1 - Type III secretion system effector EspY1, at 253,009 to 253,746 espY1 MCAODC_01330: djlA - co-chaperone DjlA, at 254,041 to 254,856 djlA MCAODC_01335: lptD - LPS assembly protein LptD, at 255,111 to 257,465 lptD MCAODC_01340: surA - peptidylprolyl isomerase SurA, at 257,518 to 258,804 surA MCAODC_01345: pdxA - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 258,804 to 259,793 pdxA
Group Condition MCAODC_01325 MCAODC_01330 MCAODC_01335 MCAODC_01340 MCAODC_01345
espY1 djlA lptD surA pdxA
carbon source Casamino-acids +0.1 +0.3 N.D. -4.6 -3.3
carbon source Casamino-acids -0.4 +0.4 N.D. -3.7 -2.6
carbon source L-Arabinose +0.2 +0.3 N.D. -2.7 -2.7
carbon source D-Glucose +0.0 -0.0 N.D. -2.0 -2.9
carbon source Sodium-DL-Lactate -0.0 -0.0 N.D. -2.2 -2.5
carbon source D-Glucose -0.1 +0.1 N.D. -1.7 -3.0
carbon source Sodium-DL-Lactate +0.1 -0.1 N.D. -1.7 -2.6
carbon source L-Arabinose -0.0 +0.4 N.D. -1.9 -2.9
phage Bas14 +0.2 -0.3 N.D. -2.3 +0.1
phage WM_Bas41 +0.0 +0.0 N.D. -2.0 +0.0
phage Bas14 +0.4 -0.4 N.D. -2.2 +0.4
phage WM_RB68 -0.2 -0.0 N.D. -1.4 +0.1
phage Bas09 +0.0 -0.2 N.D. -1.2 -0.1
phage TP9 +0.0 -0.1 N.D. -1.2 +0.2
phage WM_EV240 -0.1 -0.4 N.D. -0.2 -0.1
phage WM_Bas09 +0.4 -0.0 N.D. -1.3 +0.2
phage Bas09 +0.1 -0.2 N.D. -0.9 +0.2
phage WM_Bas14 +0.1 +0.0 N.D. -0.7 +0.0
phage WM_Bas09 +0.2 +0.2 N.D. -0.9 -0.0
phage WM_TP9 -0.1 +0.2 N.D. -0.4 -0.2
no phage control Control_ECRC101_WM +0.0 +0.3 N.D. -0.5 -0.1
phage WM_TP9 -0.0 +0.3 N.D. -0.3 -0.0
phage WM_EV240 -0.0 -0.1 N.D. -0.0 +0.4
no phage control Control_ECRC101_WM +0.1 +0.2 N.D. +0.1 +0.2
phage EV240 +0.2 -0.1 N.D. +1.2 -0.0
phage EV240 +0.3 -0.2 N.D. +1.3 +0.3
remove
MCAODC_01325
plot
remove
MCAODC_01330
plot
remove
MCAODC_01335
remove
MCAODC_01340
plot
remove
MCAODC_01345
plot