Fitness for 5 genes in Escherichia coli ECRC101

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500 ntrapA and rluA are separated by 11 nucleotidesrluA and espY1 are separated by 417 nucleotidesespY1 and djlA are separated by 294 nucleotidesdjlA and lptD are separated by 254 nucleotides MCAODC_01315: rapA - RNA polymerase-associated protein RapA, at 249,014 to 251,920 rapA MCAODC_01320: rluA - bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA, at 251,932 to 252,591 rluA MCAODC_01325: espY1 - Type III secretion system effector EspY1, at 253,009 to 253,746 espY1 MCAODC_01330: djlA - co-chaperone DjlA, at 254,041 to 254,856 djlA MCAODC_01335: lptD - LPS assembly protein LptD, at 255,111 to 257,465 lptD
Group Condition MCAODC_01315 MCAODC_01320 MCAODC_01325 MCAODC_01330 MCAODC_01335
rapA rluA espY1 djlA lptD
phage Bas14 -2.0 -0.2 +0.2 -0.3 N.D.
phage Bas14 -1.4 -0.3 +0.4 -0.4 N.D.
phage Bas09 -0.6 +0.1 +0.0 -0.2 N.D.
phage TP9 -0.5 -0.0 +0.0 -0.1 N.D.
no phage control Control_ECRC101_WM -0.3 -0.3 +0.1 +0.2 N.D.
phage WM_RB68 +0.1 -0.1 -0.2 -0.0 N.D.
phage WM_TP9 -0.1 -0.2 -0.1 +0.2 N.D.
phage WM_TP9 -0.2 -0.3 -0.0 +0.3 N.D.
carbon source Sodium-DL-Lactate -0.4 +0.3 +0.1 -0.1 N.D.
no phage control Control_ECRC101_WM -0.2 -0.2 +0.0 +0.3 N.D.
phage WM_Bas14 -0.2 -0.1 +0.1 +0.0 N.D.
carbon source D-Glucose -0.3 +0.2 -0.1 +0.1 N.D.
phage WM_Bas41 -0.2 +0.1 +0.0 +0.0 N.D.
carbon source Sodium-DL-Lactate -0.2 +0.3 -0.0 -0.0 N.D.
carbon source L-Arabinose -0.2 -0.1 -0.0 +0.4 N.D.
carbon source L-Arabinose -0.3 +0.0 +0.2 +0.3 N.D.
carbon source D-Glucose -0.1 +0.3 +0.0 -0.0 N.D.
carbon source Casamino-acids +0.2 +0.0 -0.4 +0.4 N.D.
phage WM_EV240 +0.8 -0.1 -0.1 -0.4 N.D.
phage WM_Bas09 -0.2 +0.1 +0.2 +0.2 N.D.
phage Bas09 +0.1 +0.3 +0.1 -0.2 N.D.
phage WM_Bas09 -0.2 +0.2 +0.4 -0.0 N.D.
phage WM_EV240 +0.7 +0.1 -0.0 -0.1 N.D.
carbon source Casamino-acids +0.2 +0.5 +0.1 +0.3 N.D.
phage EV240 +2.2 +0.6 +0.2 -0.1 N.D.
phage EV240 +2.4 +0.8 +0.3 -0.2 N.D.
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