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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
leuC1 and leuD are separated by 10 nucleotides
leuD and sgrR are separated by 327 nucleotides
sgrR and MCAODC_01260 are separated by 155 nucleotides
MCAODC_01260 and espY2 overlap by 35 nucleotides
MCAODC_01240: leuC1 - 3-isopropylmalate dehydratase large subunit 1, at 231,739 to 233,139
leuC1
MCAODC_01245: leuD - 3-isopropylmalate dehydratase small subunit, at 233,150 to 233,755
leuD
MCAODC_01255: sgrR - DNA-binding transcriptional regulator SgrR, at 234,083 to 235,741
sgrR
MCAODC_01260: MCAODC_01260 - hypothetical protein, at 235,897 to 236,004
_01260
MCAODC_01265: espY2 - T3SS effector EspY2, at 235,970 to 236,539
espY2
Group
Condition
MCAODC
_01240
MCAODC
_01245
MCAODC
_01255
MCAODC
_01260
MCAODC
_01265
leuC1
leuD
sgrR
espY2
carbon source
Sodium-DL-Lactate
-6.2
-6.3
-0.0
-0.1
+0.1
carbon source
L-Arabinose
-6.1
-5.4
-0.1
-0.0
+0.1
carbon source
D-Glucose
-5.8
-4.2
-0.1
+0.6
-0.2
carbon source
Sodium-DL-Lactate
-5.0
-4.3
+0.1
+0.9
-0.3
carbon source
L-Arabinose
-6.0
-3.8
+0.2
+0.9
+0.3
carbon source
D-Glucose
-4.1
-4.3
+0.4
+0.1
+0.0
no phage control
Control_ECRC101_WM
-2.5
-2.7
-0.0
-0.4
-0.0
no phage control
Control_ECRC101_WM
-2.2
-2.8
+0.2
-0.0
-0.1
phage
WM_EV240
-0.1
-0.2
+0.1
-2.7
-0.1
phage
Bas14
+0.1
-0.2
-0.1
-2.6
+0.3
phage
WM_Bas09
-0.4
-0.4
+0.2
-1.6
-0.1
phage
WM_Bas14
-0.4
-0.3
+0.0
-1.3
+0.2
phage
Bas09
+0.1
+0.1
+0.2
-1.9
-0.0
phage
WM_TP9
-0.5
-0.5
-0.1
-0.5
+0.1
phage
WM_Bas41
-0.3
-0.5
-0.2
-0.1
-0.3
phage
WM_Bas09
-0.4
-0.6
-0.0
-0.4
+0.3
phage
WM_RB68
-0.2
-0.2
-0.1
-0.3
-0.0
phage
WM_TP9
-0.2
-0.2
-0.2
+0.1
-0.2
phage
Bas09
+0.0
-0.3
+0.0
-0.3
-0.0
phage
TP9
-0.1
+0.2
-0.1
-0.2
-0.1
phage
EV240
-0.1
-0.1
+0.0
-0.3
+0.3
phage
Bas14
+0.1
-0.2
-0.0
-0.1
+0.3
phage
WM_EV240
+0.0
+0.1
+0.1
+0.0
-0.1
phage
EV240
-0.1
+0.1
-0.0
+0.7
+0.0
carbon source
Casamino-acids
+0.1
-0.1
+0.1
+0.5
+0.1
carbon source
Casamino-acids
-0.1
+0.3
+0.1
+1.1
+0.2
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