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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
speE and speD are separated by 15 nucleotides
speD and yacL are separated by 37 nucleotides
yacL and acnB are separated by 175 nucleotides
acnB and yacH are separated by 354 nucleotides
MCAODC_00980: speE - polyamine aminopropyltransferase, at 176,374 to 177,240
speE
MCAODC_00985: speD - adenosylmethionine decarboxylase, at 177,256 to 178,050
speD
MCAODC_00990: yacL - protein YacL, at 178,088 to 178,450
yacL
MCAODC_00995: acnB - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, at 178,626 to 181,223
acnB
MCAODC_01000: yacH - Uncharacterized protein YacH, at 181,578 to 183,431
yacH
Group
Condition
MCAODC
_00980
MCAODC
_00985
MCAODC
_00990
MCAODC
_00995
MCAODC
_01000
speE
speD
yacL
acnB
yacH
phage
WM_RB68
-0.0
+0.0
-0.4
-3.9
-0.1
carbon source
Casamino-acids
-0.5
-0.1
-0.1
-3.0
+0.0
no phage control
Control_ECRC101_WM
+0.0
-0.3
+0.0
-3.0
+0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.1
-0.0
-3.1
-0.0
phage
WM_EV240
+0.3
-0.0
-0.0
-3.1
+0.1
phage
WM_Bas41
-0.0
-0.0
+0.1
-2.8
+0.1
carbon source
L-Arabinose
+0.1
-0.3
-0.1
-2.2
+0.2
phage
WM_TP9
-0.1
-0.0
+0.0
-2.1
+0.1
no phage control
Control_ECRC101_WM
+0.1
+0.0
-0.0
-2.2
-0.0
phage
WM_TP9
+0.2
+0.0
-0.1
-2.3
+0.1
carbon source
L-Arabinose
-0.3
-0.2
+0.1
-1.7
+0.2
carbon source
Casamino-acids
-0.1
-0.0
+0.3
-2.1
+0.2
phage
WM_Bas09
+0.0
-0.1
-0.3
-1.3
-0.1
carbon source
D-Glucose
+0.3
+0.2
-0.1
-2.2
+0.1
phage
WM_Bas14
+0.1
+0.0
+0.0
-1.6
-0.0
carbon source
Sodium-DL-Lactate
-0.2
+0.1
-0.1
-1.4
+0.1
phage
WM_EV240
+0.4
+0.0
-0.1
-1.6
-0.1
phage
Bas09
+0.2
-0.1
-0.1
-1.1
-0.1
phage
Bas09
+0.2
+0.0
+0.1
-1.2
-0.2
phage
EV240
+0.5
+0.1
-0.1
-1.0
-0.0
phage
Bas14
+0.2
-0.0
+0.4
-1.0
-0.2
phage
Bas14
+0.3
-0.1
+0.2
-0.5
-0.0
phage
TP9
+0.6
-0.1
+0.2
-0.7
+0.0
phage
WM_Bas09
+0.1
-0.2
+0.1
-0.1
+0.1
phage
EV240
+0.6
+0.2
-0.2
-0.5
+0.1
carbon source
D-Glucose
+0.2
+0.1
+0.1
-0.1
+0.3
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