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Protein
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Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
pcnB and folK overlap by 4 nucleotides
folK and MCAODC_00880 are separated by 280 nucleotides
MCAODC_00880 and ecpD are separated by 86 nucleotides
ecpD and fimD are separated by 41 nucleotides
MCAODC_00870: pcnB - polynucleotide adenylyltransferase PcnB, at 153,795 to 155,159
pcnB
MCAODC_00875: folK - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 155,156 to 155,638
folK
MCAODC_00880: MCAODC_00880 - fimbrial protein, at 155,919 to 156,515
_00880
MCAODC_00885: ecpD - fimbrial chaperone, at 156,602 to 157,327
ecpD
MCAODC_00890: fimD - outer membrane usher protein, at 157,369 to 159,969
fimD
Group
Condition
MCAODC
_00870
MCAODC
_00875
MCAODC
_00880
MCAODC
_00885
MCAODC
_00890
pcnB
folK
ecpD
fimD
phage
Bas14
-2.4
N.D.
+0.0
+0.1
+0.1
phage
Bas14
-2.2
N.D.
+0.2
+0.1
+0.1
phage
WM_TP9
-1.0
N.D.
-0.1
-0.0
-0.1
phage
WM_Bas09
-0.8
N.D.
-0.2
-0.1
-0.0
phage
WM_TP9
-1.2
N.D.
+0.0
+0.1
+0.0
phage
WM_Bas14
-0.9
N.D.
+0.0
+0.1
-0.0
no phage control
Control_ECRC101_WM
-1.0
N.D.
+0.1
+0.1
+0.0
phage
TP9
-0.5
N.D.
-0.3
+0.2
-0.1
phage
WM_Bas41
-0.8
N.D.
+0.0
+0.2
-0.1
phage
WM_RB68
-0.5
N.D.
+0.1
-0.0
+0.0
phage
WM_Bas09
-0.6
N.D.
-0.0
+0.1
+0.1
carbon source
D-Glucose
-0.7
N.D.
+0.1
+0.1
+0.1
phage
WM_EV240
-0.4
N.D.
+0.1
-0.0
-0.0
carbon source
Casamino-acids
-0.5
N.D.
-0.2
+0.4
+0.1
phage
Bas09
-0.3
N.D.
-0.0
-0.0
+0.1
carbon source
L-Arabinose
-0.3
N.D.
+0.1
-0.2
+0.1
carbon source
Sodium-DL-Lactate
-0.3
N.D.
-0.0
-0.1
+0.1
carbon source
D-Glucose
-0.8
N.D.
+0.4
+0.2
+0.1
no phage control
Control_ECRC101_WM
-0.3
N.D.
-0.0
+0.2
+0.1
phage
Bas09
-0.1
N.D.
+0.1
+0.0
-0.1
phage
EV240
+0.1
N.D.
-0.3
-0.0
+0.1
carbon source
Casamino-acids
-0.6
N.D.
+0.2
+0.4
+0.0
carbon source
L-Arabinose
-0.4
N.D.
+0.0
+0.3
+0.1
carbon source
Sodium-DL-Lactate
-0.1
N.D.
+0.1
+0.1
+0.1
phage
WM_EV240
+0.3
N.D.
+0.0
+0.1
-0.0
phage
EV240
+0.6
N.D.
-0.0
-0.2
+0.1
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