Fitness for 5 genes in Escherichia coli ECRC101

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500 ntyafC and dkgB overlap by 4 nucleotidesdkgB and Asp_trna are separated by 162 nucleotidesAsp_trna and 5S_rrna are separated by 54 nucleotides5S_rrna and 23S_rrna are separated by 94 nucleotides MCAODC_00515: yafC - DNA-binding transcriptional regulator YafC, at 82,998 to 83,912 yafC MCAODC_00520: dkgB - 2,5-didehydrogluconate reductase DkgB, at 83,909 to 84,712 dkgB MCAODC_00525: Asp_trna - tRNA-Asp(gtc), at 84,875 to 84,951 _trna MCAODC_00530: 5S_rrna - 5S ribosomal RNA, at 85,006 to 85,121 _rrna MCAODC_00535: 23S_rrna - 23S ribosomal RNA, at 85,216 to 88,120 _rrna
Group Condition MCAODC_00515 MCAODC_00520 MCAODC_00525 MCAODC_00530 MCAODC_00535
yafC dkgB Asp_trna 5S_rrna 23S_rrna
carbon source D-Glucose -0.6 +0.3 N.D. N.D. N.D.
phage Bas14 -0.3 +0.1 N.D. N.D. N.D.
phage WM_TP9 +0.1 -0.2 N.D. N.D. N.D.
phage Bas09 -0.0 -0.1 N.D. N.D. N.D.
phage Bas09 -0.1 -0.1 N.D. N.D. N.D.
phage WM_RB68 -0.1 +0.0 N.D. N.D. N.D.
phage WM_EV240 -0.0 -0.0 N.D. N.D. N.D.
carbon source L-Arabinose -0.1 +0.1 N.D. N.D. N.D.
phage WM_EV240 +0.2 -0.3 N.D. N.D. N.D.
phage WM_Bas09 +0.0 -0.0 N.D. N.D. N.D.
phage WM_Bas41 -0.2 +0.2 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate -0.1 +0.2 N.D. N.D. N.D.
no phage control Control_ECRC101_WM -0.2 +0.2 N.D. N.D. N.D.
phage WM_Bas09 -0.1 +0.2 N.D. N.D. N.D.
phage TP9 +0.0 +0.1 N.D. N.D. N.D.
carbon source Casamino-acids +0.2 +0.0 N.D. N.D. N.D.
phage WM_Bas14 -0.1 +0.3 N.D. N.D. N.D.
phage EV240 +0.3 -0.0 N.D. N.D. N.D.
phage Bas14 +0.1 +0.2 N.D. N.D. N.D.
phage WM_TP9 +0.2 +0.1 N.D. N.D. N.D.
carbon source Casamino-acids +0.4 -0.0 N.D. N.D. N.D.
phage EV240 -0.0 +0.4 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate +0.2 +0.2 N.D. N.D. N.D.
carbon source L-Arabinose +0.0 +0.3 N.D. N.D. N.D.
carbon source D-Glucose +0.1 +0.3 N.D. N.D. N.D.
no phage control Control_ECRC101_WM +0.1 +0.4 N.D. N.D. N.D.
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