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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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500 nt
tssG and fha are separated by 24 nucleotides
fha and tssJ overlap by 4 nucleotides
tssJ and tssK are separated by 2 nucleotides
tssK and tssL are separated by 4 nucleotides
MCAODC_00395: tssG - Type VI secretion system protein TssG, at 58,287 to 59,369
tssG
MCAODC_00400: fha - Type VI secretion system protein Fha, at 59,394 to 60,674
fha
MCAODC_00405: tssJ - Type VI secretion system protein TssJ, at 60,671 to 61,195
tssJ
MCAODC_00410: tssK - type VI secretion system baseplate subunit TssK, at 61,198 to 62,529
tssK
MCAODC_00415: tssL - Type VI secretion system protein TssL, at 62,534 to 63,295
tssL
Group
Condition
MCAODC
_00395
MCAODC
_00400
MCAODC
_00405
MCAODC
_00410
MCAODC
_00415
tssG
fha
tssJ
tssK
tssL
phage
Bas14
-0.4
+0.1
-0.0
-0.3
-0.3
no phage control
Control_ECRC101_WM
+0.1
+0.1
-0.1
-0.1
-0.7
phage
WM_RB68
+0.2
+0.0
-0.3
+0.0
-0.5
phage
WM_Bas41
-0.2
+0.3
+0.1
-0.1
-0.3
carbon source
Sodium-DL-Lactate
+0.1
+0.1
-0.3
+0.0
-0.1
carbon source
Casamino-acids
+0.2
-0.1
-0.3
-0.0
+0.2
phage
Bas09
+0.0
-0.2
-0.3
+0.0
+0.4
carbon source
D-Glucose
-0.0
-0.1
-0.3
+0.1
+0.4
phage
WM_Bas09
-0.2
+0.2
+0.1
+0.2
-0.1
phage
WM_Bas09
-0.1
+0.0
+0.3
+0.1
-0.1
phage
WM_Bas14
+0.1
-0.3
+0.1
+0.1
+0.2
phage
WM_TP9
+0.3
-0.0
-0.1
+0.1
-0.0
phage
WM_EV240
+0.4
+0.2
+0.3
+0.2
-0.7
carbon source
L-Arabinose
+0.2
+0.1
+0.0
-0.1
+0.2
phage
EV240
+0.4
-0.2
+0.1
-0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.0
+0.1
+0.4
+0.1
-0.2
phage
EV240
+0.3
+0.1
+0.0
-0.2
+0.3
carbon source
D-Glucose
+0.1
+0.3
+0.0
+0.1
-0.0
phage
TP9
+0.5
+0.0
+0.0
+0.0
+0.1
phage
Bas14
+0.4
-0.1
-0.1
-0.1
+0.5
no phage control
Control_ECRC101_WM
+0.2
+0.2
+0.2
+0.1
+0.1
phage
Bas09
+0.3
-0.1
+0.3
+0.1
+0.1
carbon source
L-Arabinose
+0.1
+0.0
+0.5
-0.1
+0.3
phage
WM_TP9
+0.1
+0.2
+0.4
+0.2
+0.2
phage
WM_EV240
+0.2
+0.4
+0.3
+0.0
+0.3
carbon source
Casamino-acids
+0.2
+0.4
+0.8
+0.1
+0.4
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