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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECRC101
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ykfJ and yafP are separated by 306 nucleotides
yafP and yafO are separated by 84 nucleotides
yafO and yafN are separated by 2 nucleotides
yafN and dinB are separated by 51 nucleotides
MCAODC_00230: ykfJ - Putative uncharacterized protein YkfJ, at 22,974 to 23,240
ykfJ
MCAODC_00235: yafP - GNAT family N-acetyltransferase, at 23,547 to 23,924
yafP
MCAODC_00240: yafO - type II toxin-antitoxin system mRNA interferase toxin YafO, at 24,009 to 24,407
yafO
MCAODC_00245: yafN - type I toxin-antitoxin system antitoxin YafN, at 24,410 to 24,703
yafN
MCAODC_00250: dinB - DNA polymerase IV, at 24,755 to 25,810
dinB
Group
Condition
MCAODC
_00230
MCAODC
_00235
MCAODC
_00240
MCAODC
_00245
MCAODC
_00250
ykfJ
yafP
yafO
yafN
dinB
phage
WM_EV240
+0.1
-1.3
-0.6
N.D.
+0.3
phage
WM_RB68
-0.8
+0.3
-0.1
N.D.
-0.0
phage
WM_EV240
-0.2
+0.2
-0.3
N.D.
-0.0
phage
WM_Bas41
-0.2
-0.6
+0.4
N.D.
+0.0
phage
WM_TP9
-0.3
-0.2
+0.2
N.D.
+0.0
phage
WM_TP9
-0.7
+0.4
-0.1
N.D.
+0.1
phage
TP9
-0.2
-0.1
-0.1
N.D.
+0.2
carbon source
L-Arabinose
+0.0
-0.1
-0.3
N.D.
+0.1
phage
Bas09
+0.1
-0.3
+0.1
N.D.
-0.2
phage
Bas14
-0.4
-0.1
+0.0
N.D.
+0.4
carbon source
D-Glucose
+0.3
-0.1
-0.1
N.D.
-0.2
phage
WM_Bas14
+0.1
+0.3
+0.1
N.D.
-0.2
no phage control
Control_ECRC101_WM
+0.1
+0.1
+0.0
N.D.
+0.1
phage
Bas09
-0.3
+0.3
+0.2
N.D.
+0.0
phage
WM_Bas09
+0.2
-0.3
+0.2
N.D.
+0.4
phage
EV240
+0.5
-0.0
+0.3
N.D.
-0.2
no phage control
Control_ECRC101_WM
+0.2
+0.2
+0.0
N.D.
+0.2
carbon source
Casamino-acids
+0.2
+0.2
+0.3
N.D.
+0.1
carbon source
D-Glucose
+0.5
+0.0
+0.3
N.D.
+0.0
carbon source
L-Arabinose
+0.3
+0.0
+0.4
N.D.
+0.2
carbon source
Sodium-DL-Lactate
+0.1
-0.0
+0.6
N.D.
+0.2
phage
WM_Bas09
+0.2
-0.1
+0.6
N.D.
+0.2
phage
Bas14
+0.1
+0.2
+0.2
N.D.
+0.5
carbon source
Casamino-acids
+0.0
+0.3
+0.7
N.D.
+0.1
carbon source
Sodium-DL-Lactate
+0.3
+0.2
+0.4
N.D.
+0.3
phage
EV240
+0.3
+0.5
+0.4
N.D.
+0.2
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