Fitness for 5 genes in Escherichia coli ECRC101

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500 ntgpt and pepD are separated by 260 nucleotidespepD and prfH are separated by 56 nucleotidesprfH and ykfJ overlap by 32 nucleotidesykfJ and yafP are separated by 306 nucleotides MCAODC_00215: gpt - xanthine phosphoribosyltransferase, at 20,272 to 20,730 gpt MCAODC_00220: pepD - cytosol nonspecific dipeptidase, at 20,991 to 22,448 pepD MCAODC_00225: prfH - peptide chain release factor H, at 22,505 to 23,005 prfH MCAODC_00230: ykfJ - Putative uncharacterized protein YkfJ, at 22,974 to 23,240 ykfJ MCAODC_00235: yafP - GNAT family N-acetyltransferase, at 23,547 to 23,924 yafP
Group Condition MCAODC_00215 MCAODC_00220 MCAODC_00225 MCAODC_00230 MCAODC_00235
gpt pepD prfH ykfJ yafP
phage WM_EV240 -0.1 +0.1 -0.4 +0.1 -1.3
phage WM_TP9 -0.2 -0.1 -0.4 -0.3 -0.2
phage WM_Bas41 -0.3 -0.3 +0.3 -0.2 -0.6
phage Bas09 -0.0 -0.4 -0.4 +0.1 -0.3
phage TP9 -0.1 -0.2 -0.3 -0.2 -0.1
phage WM_TP9 -0.5 -0.2 -0.0 -0.7 +0.4
phage WM_RB68 -0.2 -0.1 +0.1 -0.8 +0.3
phage WM_Bas09 -0.2 +0.0 -0.3 +0.2 -0.1
phage Bas09 -0.2 -0.2 +0.1 -0.3 +0.3
carbon source D-Glucose -0.6 +0.0 +0.1 +0.3 -0.1
phage Bas14 +0.2 -0.2 -0.5 +0.1 +0.2
phage Bas14 +0.2 +0.1 +0.1 -0.4 -0.1
carbon source L-Arabinose -0.5 +0.2 +0.2 +0.0 -0.1
carbon source Sodium-DL-Lactate -0.3 -0.2 +0.0 +0.3 +0.2
carbon source Casamino-acids +0.3 -0.6 +0.0 +0.2 +0.2
carbon source L-Arabinose -0.3 -0.1 +0.2 +0.3 +0.0
phage WM_EV240 +0.1 -0.1 +0.2 -0.2 +0.2
phage WM_Bas09 +0.1 -0.2 +0.4 +0.2 -0.3
carbon source Casamino-acids -0.1 -0.1 +0.2 +0.0 +0.3
no phage control Control_ECRC101_WM +0.0 -0.1 -0.1 +0.2 +0.2
phage WM_Bas14 +0.3 -0.1 -0.3 +0.1 +0.3
phage EV240 +0.5 -0.3 -0.3 +0.5 -0.0
phage EV240 +0.4 -0.1 -0.5 +0.3 +0.5
no phage control Control_ECRC101_WM +0.4 -0.0 -0.0 +0.1 +0.1
carbon source Sodium-DL-Lactate -0.1 -0.1 +0.7 +0.1 -0.0
carbon source D-Glucose -0.2 -0.0 +0.3 +0.5 +0.0
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