Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS24430 and LU632_RS24435 are separated by 77 nucleotidesLU632_RS24435 and LU632_RS24440 are separated by 136 nucleotidesLU632_RS24440 and LU632_RS24445 are separated by 249 nucleotidesLU632_RS24445 and hdfR are separated by 120 nucleotides LU632_RS24430: LU632_RS24430 - IS256 family transposase, at 4,660,917 to 4,662,125 _RS24430 LU632_RS24435: LU632_RS24435 - DDE-type integrase/transposase/recombinase, at 4,662,203 to 4,663,166 _RS24435 LU632_RS24440: LU632_RS24440 - IS3 family transposase, at 4,663,303 to 4,663,694 _RS24440 LU632_RS24445: LU632_RS24445 - DUF413 domain-containing protein, at 4,663,944 to 4,664,282 _RS24445 LU632_RS24450: hdfR - HTH-type transcriptional regulator HdfR, at 4,664,403 to 4,665,227 hdfR
Group Condition LU632_RS24430 LU632_RS24435 LU632_RS24440 LU632_RS24445 LU632_RS24450
hdfR
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. +0.1 -0.1 -3.6 -1.1
in planta plant=Squash; plant sample=QP3; plant location=NA N.D. -1.1 +0.2 -2.4 -1.1
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. -0.7 -0.2 -2.1 -1.4
mjm9 MJM9 N.D. -0.3 +0.0 -2.4 -1.2
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) N.D. -0.5 -0.1 -2.7 -0.4
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. -0.5 +0.2 -0.8 -2.5
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. -0.7 -0.1 -2.5 -0.4
in planta plant=Melon; plant sample=M5; plant location=P2 N.D. -0.1 +0.2 -2.0 -1.0
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. -0.5 -0.2 -1.2 -0.8
melonxylem MelonXylem N.D. -0.4 +0.1 -1.2 -0.8
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. -0.0 +0.2 -1.5 -0.9
mjm9 MJM9 N.D. -0.4 -0.0 -0.6 -1.2
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) N.D. +0.4 -0.3 -0.8 -1.1
in planta plant=Squash; plant sample=QP2; plant location=NA N.D. -0.9 +0.2 -0.1 -0.8
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. -0.1 -0.2 -0.5 -0.8
hbm-glucose HBM-Glucose N.D. -0.3 +0.2 -1.1 -0.3
hbm-glucose HBM-Glucose N.D. -0.5 +0.2 -0.8 -0.2
melonxylem MelonXylem N.D. -0.4 +0.1 -0.2 -0.8
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) N.D. +0.6 -0.6 -0.9 -0.2
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. -0.4 +0.6 -1.1 -0.2
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. -0.3 +0.3 +0.0 -0.8
hbm-cucxylem HBM-CucXylem N.D. -0.6 +0.3 -0.5 +0.8
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. +1.4 +0.1 -0.9 -0.5
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. +1.8 -0.4 -0.1 -0.9
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. -0.5 -0.0 +1.0 +0.2
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. +0.6 +0.5 -0.3 +0.2
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. -0.0 +0.3 -0.1 +1.0
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. +0.2 -0.1 +0.9 +0.4
hbm-cucxylem HBM-CucXylem N.D. -0.1 +0.1 +0.2 +1.4
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. -0.1 +0.4 +0.6 +0.6
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