Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntubiD and rfaH are separated by 277 nucleotidesrfaH and tatD are separated by 21 nucleotidestatD and tatC are separated by 74 nucleotidestatC and tatB are separated by 2 nucleotides LU632_RS23965: ubiD - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 4,568,914 to 4,570,416 ubiD LU632_RS23970: rfaH - transcription/translation regulatory transformer protein RfaH, at 4,570,694 to 4,571,182 rfaH LU632_RS23975: tatD - 3'-5' ssDNA/RNA exonuclease TatD, at 4,571,204 to 4,571,998 tatD LU632_RS23980: tatC - Sec-independent protein translocase subunit TatC, at 4,572,073 to 4,572,831 tatC LU632_RS23985: tatB - Sec-independent protein translocase protein TatB, at 4,572,834 to 4,573,481 tatB
Group Condition LU632_RS23965 LU632_RS23970 LU632_RS23975 LU632_RS23980 LU632_RS23985
ubiD rfaH tatD tatC tatB
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. +0.4 +0.3 -8.0 -2.6
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) N.D. +0.7 -0.0 -8.6 -1.6
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. +1.5 +0.4 -8.6 -2.4
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. +0.6 -0.1 -7.0 -2.4
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. +1.0 +0.2 -5.8 -3.0
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. +2.1 -0.2 -8.0 -1.5
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. +1.1 +0.1 -5.9 -2.7
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. +2.3 +0.1 -7.4 -2.2
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. +1.5 +0.7 -5.3 -3.3
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. +0.9 +0.1 -5.6 -1.5
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) N.D. +1.9 +0.2 -6.0 -2.0
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. +0.7 +0.1 -4.9 -1.7
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. +2.3 -0.0 -5.4 -2.5
in planta plant=Melon; plant sample=M5; plant location=P2 N.D. +2.7 -0.3 -5.4 -2.6
in planta plant=Squash; plant sample=QP2; plant location=NA N.D. +0.9 -0.2 -3.9 -1.5
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. +1.0 -0.1 -3.1 -2.5
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. +2.6 +0.6 -6.2 -1.5
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) N.D. +1.6 +0.6 -4.9 -1.3
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. +2.6 -0.5 -4.6 -1.4
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. +1.1 -0.1 -3.1 -1.4
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. -0.1 -0.7 -1.3 -1.1
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. +0.3 +0.3 -2.2 -0.8
melonxylem MelonXylem N.D. -0.9 -0.2 -1.3 +0.0
cucxylem CucXylem N.D. -1.5 -0.3 -0.5 +0.1
melonxylem MelonXylem N.D. -0.5 -0.0 -1.3 -0.2
cucxylem CucXylem N.D. -1.6 -0.1 -0.4 +0.1
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) N.D. +0.8 +0.3 -1.7 -0.9
in planta plant=Squash; plant sample=QP3; plant location=NA N.D. +0.1 +0.3 -1.1 -0.7
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. +0.2 -0.1 -1.1 -0.4
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. +0.5 -0.2 -1.4 -0.2
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