Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 nthofQ and LU632_RS22880 overlap by 65 nucleotidesLU632_RS22880 and LU632_RS22885 overlap by 14 nucleotidesLU632_RS22885 and LU632_RS22890 overlap by 11 nucleotidesLU632_RS22890 and pilM overlap by 1 nucleotides LU632_RS22875: hofQ - DNA uptake porin HofQ, at 4,355,336 to 4,356,592 hofQ LU632_RS22880: LU632_RS22880 - DNA utilization family protein, at 4,356,528 to 4,356,932 _RS22880 LU632_RS22885: LU632_RS22885 - hypothetical protein, at 4,356,919 to 4,357,422 _RS22885 LU632_RS22890: LU632_RS22890 - PilN domain-containing protein, at 4,357,412 to 4,357,996 _RS22890 LU632_RS22895: pilM - pilus assembly protein PilM, at 4,357,996 to 4,358,820 pilM
Group Condition LU632_RS22875 LU632_RS22880 LU632_RS22885 LU632_RS22890 LU632_RS22895
hofQ pilM
in planta plant=Melon; plant sample=M4; plant location=P2 -0.6 -0.4 -0.0 -0.6 +0.0
in planta plant=Melon; plant sample=MP3; plant location=NA -0.4 -0.0 -0.1 -0.8 +0.1
in planta plant=Melon; plant sample=MP2; plant location=NA -0.2 -0.3 -0.1 -0.1 -0.3
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) -0.3 -0.1 -0.4 -0.4 +0.2
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.4 -0.4 -0.3 +0.3 +0.1
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) -0.1 -0.5 -0.0 -0.2 -0.0
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) -0.4 -0.0 +0.3 -0.3 -0.3
hbm-cucxylem HBM-CucXylem -0.0 -0.1 -0.2 -0.4 +0.1
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -0.1 -0.4 -0.1 +0.0 +0.0
mjm9 MJM9 +0.0 -0.2 -0.1 -0.4 +0.1
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) -0.4 -0.3 -0.6 +0.2 +0.6
hbm-cucxylem HBM-CucXylem +0.1 -0.2 -0.2 -0.3 +0.1
hbm-glucose HBM-Glucose +0.0 -0.3 -0.1 -0.1 +0.0
in planta plant=Squash; plant sample=QP1; plant location=NA -0.1 -0.3 -0.0 -0.2 +0.3
in planta plant=Melon; plant sample=MP1; plant location=NA -0.2 -0.2 -0.1 +0.6 -0.4
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) +0.1 +0.1 -0.3 +0.2 -0.3
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) -0.0 -0.4 +0.2 +0.0 -0.0
melonxylem MelonXylem -0.1 +0.1 -0.1 -0.3 +0.2
in planta plant=Squash; plant sample=QP2; plant location=NA +0.2 -0.2 +0.0 -0.4 +0.1
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) -0.3 +0.0 +0.1 +0.3 -0.1
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) -0.1 -0.1 +0.1 +0.2 -0.1
in planta plant=Cucumber; plant sample=CP3; plant location=NA +0.4 -0.2 +0.0 -0.6 +0.4
in planta plant=Melon; plant sample=M2; plant location=P2 -0.0 -0.1 +0.1 -0.5 +0.5
in planta plant=Melon; plant sample=M5; plant location=P2 -0.2 -0.1 -0.2 +0.2 +0.3
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) -0.3 +0.2 -0.2 +0.5 -0.1
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) -0.3 +0.3 +0.1 +0.3 -0.3
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) -0.1 +0.4 -0.1 -0.1 +0.2
in planta plant=Squash; plant sample=QP3; plant location=NA +0.0 +0.1 +0.2 -0.3 +0.3
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.2 +0.3 +0.1 +0.4 -0.1
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -0.2 +0.1 +0.2 +0.6 -0.3
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