Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntrfaC and LU632_RS21930 are separated by 6 nucleotidesLU632_RS21930 and LU632_RS21935 are separated by 42 nucleotidesLU632_RS21935 and LU632_RS21940 are separated by 275 nucleotidesLU632_RS21940 and LU632_RS21945 are separated by 200 nucleotides LU632_RS21925: rfaC - lipopolysaccharide heptosyltransferase RfaC, at 4,187,967 to 4,188,941 rfaC LU632_RS21930: LU632_RS21930 - glycosyltransferase, at 4,188,948 to 4,189,865 _RS21930 LU632_RS21935: LU632_RS21935 - deacetylase, at 4,189,908 to 4,190,885 _RS21935 LU632_RS21940: LU632_RS21940 - glycosyltransferase, at 4,191,161 to 4,192,306 _RS21940 LU632_RS21945: LU632_RS21945 - glycosyltransferase family 9 protein, at 4,192,507 to 4,193,376 _RS21945
Group Condition LU632_RS21925 LU632_RS21930 LU632_RS21935 LU632_RS21940 LU632_RS21945
rfaC
cucxylem CucXylem N.D. -4.8 +0.1 -5.4 +0.3
cucxylem CucXylem N.D. -4.6 -0.0 -4.8 +0.3
melonxylem MelonXylem N.D. -1.4 +0.1 -4.2 +0.1
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. -2.0 +0.1 -3.0 -0.2
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) N.D. -2.1 -0.2 -2.6 +0.1
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. -2.1 -0.1 -1.9 -0.2
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. -2.0 -0.4 -2.3 +0.5
melonxylem MelonXylem N.D. -1.4 +0.0 -3.2 +0.4
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. -1.5 -0.3 -2.2 +0.1
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. -2.1 +0.0 -1.8 +0.0
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. -1.5 -0.3 -2.3 +0.3
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. -1.0 +0.1 -2.4 -0.2
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. -1.3 -0.2 -1.7 -0.1
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. -1.0 +0.4 -2.2 -0.4
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. -1.9 +0.5 -1.7 -0.0
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. -1.4 -0.3 -0.8 -0.4
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. -1.8 -0.2 -0.6 -0.4
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. -1.3 +0.2 -2.1 +0.5
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) N.D. -1.5 +0.2 -1.0 +0.0
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. -1.6 +0.2 -0.6 -0.2
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. -0.3 -0.2 -2.0 +0.3
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. -0.8 -0.2 -1.2 -0.0
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. -0.5 +0.2 -2.2 +0.3
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. -1.5 +0.3 -1.5 +0.7
hbm-glucose HBM-Glucose N.D. -0.6 +0.1 -1.6 +0.1
hbm-glucose HBM-Glucose N.D. -0.6 +0.0 -1.4 +0.2
in planta plant=Melon; plant sample=M5; plant location=P2 N.D. -1.0 +0.2 -0.7 -0.2
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) N.D. -1.1 +0.2 -0.7 +0.2
hbm-sucrose HBM-Sucrose N.D. -0.2 +0.1 -1.2 +0.2
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. +0.4 +0.0 -0.9 +0.1
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