Fitness for 5 genes in Erwinia tracheiphila SCR3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntlptC and lptA overlap by 29 nucleotideslptA and lptB are separated by 10 nucleotideslptB and rpoN are separated by 46 nucleotidesrpoN and hpf are separated by 22 nucleotides LU632_RS21265: lptC - LPS export ABC transporter periplasmic protein LptC, at 4,060,271 to 4,060,846 lptC LU632_RS21270: lptA - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 4,060,818 to 4,061,366 lptA LU632_RS21275: lptB - LPS export ABC transporter ATP-binding protein, at 4,061,377 to 4,062,102 lptB LU632_RS21280: rpoN - RNA polymerase factor sigma-54, at 4,062,149 to 4,063,582 rpoN LU632_RS21285: hpf - ribosome hibernation promoting factor, at 4,063,605 to 4,063,892 hpf
Group Condition LU632_RS21265 LU632_RS21270 LU632_RS21275 LU632_RS21280 LU632_RS21285
lptC lptA lptB rpoN hpf
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) N.D. N.D. N.D. N.D. -1.1
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. N.D. N.D. N.D. -0.9
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. N.D. N.D. N.D. -0.5
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. N.D. N.D. N.D. -0.4
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. N.D. N.D. N.D. -0.4
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. N.D. N.D. N.D. -0.4
melonxylem MelonXylem N.D. N.D. N.D. N.D. -0.4
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. N.D. N.D. N.D. -0.4
in planta plant=Squash; plant sample=QP3; plant location=NA N.D. N.D. N.D. N.D. -0.3
melonxylem MelonXylem N.D. N.D. N.D. N.D. -0.2
cucxylem CucXylem N.D. N.D. N.D. N.D. -0.2
cucxylem CucXylem N.D. N.D. N.D. N.D. -0.2
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. N.D. N.D. N.D. -0.2
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) N.D. N.D. N.D. N.D. -0.1
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. N.D. N.D. N.D. -0.1
hbm-sucrose HBM-Sucrose N.D. N.D. N.D. N.D. -0.1
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. N.D. N.D. N.D. +0.1
hbm-glucose HBM-Glucose N.D. N.D. N.D. N.D. +0.1
hbm-glucose HBM-Glucose N.D. N.D. N.D. N.D. +0.1
hbm-cucxylem HBM-CucXylem N.D. N.D. N.D. N.D. +0.1
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. N.D. N.D. N.D. +0.1
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. N.D. N.D. N.D. +0.2
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. N.D. N.D. N.D. +0.2
in planta plant=Melon; plant sample=M5; plant location=P2 N.D. N.D. N.D. N.D. +0.2
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. N.D. N.D. N.D. +0.2
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. N.D. N.D. N.D. +0.3
mjm9 MJM9 N.D. N.D. N.D. N.D. +0.3
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. N.D. N.D. N.D. +0.3
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. N.D. N.D. N.D. +0.4
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. N.D. N.D. N.D. +0.6
remove
LU632_RS21265
plot		 remove
LU632_RS21270
plot		 remove
LU632_RS21275		 remove
LU632_RS21280
plot		 remove
LU632_RS21285
plot