Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 nttnpA and LU632_RS17015 are separated by 143 nucleotidesLU632_RS17015 and LU632_RS17020 overlap by 8 nucleotidesLU632_RS17020 and smpB are separated by 158 nucleotidessmpB and LU632_RS17035 are separated by 699 nucleotides LU632_RS17010: tnpA - IS200/IS605 family transposase, at 3,207,528 to 3,207,968 tnpA LU632_RS17015: LU632_RS17015 - RnfH family protein, at 3,208,112 to 3,208,399 _RS17015 LU632_RS17020: LU632_RS17020 - type II toxin-antitoxin system RatA family toxin, at 3,208,392 to 3,208,826 _RS17020 LU632_RS17025: smpB - SsrA-binding protein SmpB, at 3,208,985 to 3,209,467 smpB LU632_RS17035: LU632_RS17035 - DinI family protein, at 3,210,167 to 3,210,412 _RS17035
Group Condition LU632_RS17010 LU632_RS17015 LU632_RS17020 LU632_RS17025 LU632_RS17035
tnpA smpB
hbm-glucose HBM-Glucose N.D. -1.1 +0.3 N.D. -1.4
hbm-cucxylem HBM-CucXylem N.D. -0.3 -1.7 N.D. -0.2
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. -0.4 -0.4 N.D. -1.2
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) N.D. -2.0 +0.5 N.D. -0.4
mjm9 MJM9 N.D. -0.9 +0.4 N.D. -1.2
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. -2.5 +0.7 N.D. +0.4
mjm9 MJM9 N.D. -1.7 +0.9 N.D. -0.5
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. -1.1 +1.8 N.D. -1.1
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. -1.1 +0.8 N.D. -0.0
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. -1.2 +2.1 N.D. -1.1
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. -1.0 +1.0 N.D. -0.2
in planta plant=Squash; plant sample=QP2; plant location=NA N.D. -1.2 +0.3 N.D. +0.8
cucxylem CucXylem N.D. -1.2 +1.1 N.D. -0.1
hbm-sucrose HBM-Sucrose N.D. -0.6 +1.1 N.D. -0.7
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. -2.2 +1.9 N.D. +0.4
hbm-glucose HBM-Glucose N.D. -0.6 +1.2 N.D. -0.3
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. -1.5 +1.3 N.D. +0.7
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. -0.7 +2.4 N.D. -1.1
melonxylem MelonXylem N.D. -0.2 +1.4 N.D. -0.3
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. -0.1 +2.9 N.D. -1.3
hbm-cucxylem HBM-CucXylem N.D. +0.5 +1.4 N.D. -0.5
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) N.D. +1.6 -0.2 N.D. +0.2
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. +0.3 +1.2 N.D. +0.3
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. +0.4 +0.6 N.D. +0.8
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. +0.2 -0.1 N.D. +1.9
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. -0.7 +2.5 N.D. +0.2
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. +1.4 -0.4 N.D. +1.0
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. +0.7 +2.5 N.D. -0.6
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. +0.3 +3.5 N.D. -0.4
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. +1.0 +0.9 N.D. +2.2
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