Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntlolD and lolC overlap by 8 nucleotideslolC and LU632_RS14660 are separated by 357 nucleotidesLU632_RS14660 and LU632_RS14665 are separated by 37 nucleotidesLU632_RS14665 and LU632_RS14670 are separated by 78 nucleotides LU632_RS14650: lolD - lipoprotein-releasing ABC transporter ATP-binding protein LolD, at 2,786,561 to 2,787,265 lolD LU632_RS14655: lolC - lipoprotein-releasing ABC transporter permease subunit LolC, at 2,787,258 to 2,788,457 lolC LU632_RS14660: LU632_RS14660 - IS5 family transposase, at 2,788,815 to 2,789,659 _RS14660 LU632_RS14665: LU632_RS14665 - IS5/IS1182 family transposase, at 2,789,697 to 2,790,144 _RS14665 LU632_RS14670: LU632_RS14670 - host specificity protein, at 2,790,223 to 2,790,534 _RS14670
Group Condition LU632_RS14650 LU632_RS14655 LU632_RS14660 LU632_RS14665 LU632_RS14670
lolD lolC
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) N.D. N.D. +0.9 -1.5 -1.4
mjm9 MJM9 N.D. N.D. -0.6 -0.4 -0.1
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. N.D. +0.1 -0.4 -0.5
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. N.D. -1.2 -0.1 +0.6
hbm-cucxylem HBM-CucXylem N.D. N.D. -0.0 -0.3 -0.3
hbm-sucrose HBM-Sucrose N.D. N.D. -0.1 -0.5 +0.2
in planta plant=Squash; plant sample=QP3; plant location=NA N.D. N.D. +0.7 -0.7 -0.0
cucxylem CucXylem N.D. N.D. -0.2 +0.3 -0.1
hbm-glucose HBM-Glucose N.D. N.D. -0.2 +0.3 +0.2
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. N.D. -0.2 +0.7 -0.2
in planta plant=Squash; plant sample=QP2; plant location=NA N.D. N.D. -0.4 +0.2 +0.6
cucxylem CucXylem N.D. N.D. -0.2 +0.4 +0.3
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. N.D. -0.0 +0.3 +0.3
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. N.D. +0.9 +0.2 -0.5
melonxylem MelonXylem N.D. N.D. +0.5 -0.0 +0.2
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. N.D. +0.8 -0.1 +0.1
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. N.D. +0.0 +0.6 +0.2
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. N.D. -0.1 +0.4 +0.5
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. N.D. +0.6 -0.1 +0.4
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. N.D. +0.7 -0.3 +0.5
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. N.D. -0.5 +0.7 +0.8
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. N.D. -0.1 +0.6 +0.5
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. N.D. +1.4 -0.1 +0.3
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. N.D. +1.5 +0.1 +0.2
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. N.D. -0.4 +0.6 +1.7
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. N.D. +1.3 +0.0 +0.7
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) N.D. N.D. +1.6 +0.5 +0.2
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) N.D. N.D. +2.1 +0.3 +0.0
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. N.D. +2.0 +0.2 +1.0
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. N.D. +2.9 +3.2 -0.3
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