Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS13995 and LU632_RS14000 are separated by 174 nucleotidesLU632_RS14000 and LU632_RS14005 are separated by 124 nucleotidesLU632_RS14005 and ldcA are separated by 266 nucleotidesldcA and LU632_RS14015 are separated by 317 nucleotides LU632_RS13995: LU632_RS13995 - GlsB/YeaQ/YmgE family stress response membrane protein, at 2,687,872 to 2,688,120 _RS13995 LU632_RS14000: LU632_RS14000 - flagellar brake protein, at 2,688,295 to 2,689,026 _RS14000 LU632_RS14005: LU632_RS14005 - transglycosylase SLT domain-containing protein, at 2,689,151 to 2,689,783 _RS14005 LU632_RS14010: ldcA - muramoyltetrapeptide carboxypeptidase, at 2,690,050 to 2,690,973 ldcA LU632_RS14015: LU632_RS14015 - type VI secretion system tube protein Hcp, at 2,691,291 to 2,691,356 _RS14015
Group Condition LU632_RS13995 LU632_RS14000 LU632_RS14005 LU632_RS14010 LU632_RS14015
ldcA
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. +0.1 +0.0 -5.1 -0.1
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) N.D. -0.0 -0.1 -4.9 +0.1
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. +0.0 -0.4 -4.4 -0.0
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. -0.0 +0.2 -4.4 -0.4
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. -0.1 +0.2 -3.5 -0.7
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. +0.1 +0.5 -4.4 -0.2
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. +0.0 -0.4 -3.4 -0.3
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. -0.4 -0.1 -2.4 -0.6
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. -0.2 +0.3 -3.7 +0.2
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. +0.6 -0.4 -2.9 -0.4
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. -0.1 +0.1 -2.4 -0.5
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. -0.2 -0.2 -2.3 +0.1
in planta plant=Melon; plant sample=M5; plant location=P2 N.D. +0.2 -0.5 -2.0 -0.1
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) N.D. +0.3 -0.7 -2.2 +0.2
hbm-glucose HBM-Glucose N.D. -0.1 +0.0 -2.0 +0.1
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. +0.7 -0.2 -2.5 +0.0
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. -0.1 +0.3 -1.6 -0.3
hbm-sucrose HBM-Sucrose N.D. -0.1 +0.1 -1.9 +0.2
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) N.D. +0.4 -0.1 -2.1 +0.4
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. -0.5 +0.2 -1.4 +0.4
hbm-glucose HBM-Glucose N.D. +0.1 +0.2 -1.4 -0.1
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. +0.4 +0.2 -1.5 -0.4
hbm-sucrose HBM-Sucrose N.D. -0.0 +0.1 -1.2 -0.0
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. +0.1 +0.4 -1.8 +0.4
in planta plant=Squash; plant sample=QP2; plant location=NA N.D. -0.1 -0.2 -1.0 +0.3
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) N.D. +0.2 +0.2 -1.4 +0.2
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. +0.3 +0.2 -1.1 +0.0
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. +0.4 +0.7 -0.3 -0.7
in planta plant=Squash; plant sample=QP3; plant location=NA N.D. +0.5 -0.1 -0.6 +0.3
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. +0.3 +0.2 +0.5 +0.3
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