Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS09935 and LU632_RS09940 are separated by 15 nucleotidesLU632_RS09940 and LU632_RS09945 are separated by 52 nucleotidesLU632_RS09945 and ssuE are separated by 10 nucleotidesssuE and pyrD are separated by 377 nucleotides LU632_RS09935: LU632_RS09935 - aliphatic sulfonate ABC transporter substrate-binding protein, at 1,899,307 to 1,899,450 _RS09935 LU632_RS09940: LU632_RS09940 - IS1 family transposase, at 1,899,466 to 1,900,163 _RS09940 LU632_RS09945: LU632_RS09945 - aliphatic sulfonate ABC transporter substrate-binding protein, at 1,900,216 to 1,900,416 _RS09945 LU632_RS09950: ssuE - NADPH-dependent FMN reductase, at 1,900,427 to 1,900,968 ssuE LU632_RS09955: pyrD - quinone-dependent dihydroorotate dehydrogenase, at 1,901,346 to 1,902,356 pyrD
Group Condition LU632_RS09935 LU632_RS09940 LU632_RS09945 LU632_RS09950 LU632_RS09955
ssuE pyrD
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.2 N.D. N.D. -0.3 -6.7
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) -0.0 N.D. N.D. +0.2 -6.6
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) +0.4 N.D. N.D. +0.3 -6.7
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) -0.6 N.D. N.D. +0.3 -5.8
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) -1.0 N.D. N.D. +0.5 -5.4
hbm-glucose HBM-Glucose +0.5 N.D. N.D. +0.0 -6.4
hbm-sucrose HBM-Sucrose -0.2 N.D. N.D. +0.1 -5.8
hbm-sucrose HBM-Sucrose +0.1 N.D. N.D. -0.0 -5.9
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) +0.7 N.D. N.D. +0.1 -6.7
hbm-glucose HBM-Glucose +0.1 N.D. N.D. +0.1 -5.9
in planta plant=Squash; plant sample=QP1; plant location=NA -0.4 N.D. N.D. -0.0 -5.0
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) +0.1 N.D. N.D. -0.1 -5.2
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) +0.3 N.D. N.D. +0.6 -6.1
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) +0.1 N.D. N.D. +0.0 -5.1
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -0.3 N.D. N.D. -0.2 -4.4
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) +0.7 N.D. N.D. -0.4 -4.9
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) -0.1 N.D. N.D. +0.1 -4.6
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.1 N.D. N.D. -0.2 -4.3
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) +0.8 N.D. N.D. +0.4 -5.6
in planta plant=Melon; plant sample=M2; plant location=P2 +0.6 N.D. N.D. +0.2 -5.0
in planta plant=Melon; plant sample=MP1; plant location=NA -1.1 N.D. N.D. -0.1 -2.9
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) -0.1 N.D. N.D. +0.2 -4.3
in planta plant=Squash; plant sample=QP2; plant location=NA -0.5 N.D. N.D. -0.0 -3.6
cucxylem CucXylem -0.7 N.D. N.D. -0.0 -3.1
in planta plant=Melon; plant sample=MP2; plant location=NA -0.9 N.D. N.D. -0.4 -2.4
in planta plant=Melon; plant sample=M5; plant location=P2 +0.6 N.D. N.D. +0.5 -4.8
cucxylem CucXylem -0.2 N.D. N.D. -0.1 -3.4
in planta plant=Melon; plant sample=M4; plant location=P2 +0.3 N.D. N.D. +0.5 -4.1
in planta plant=Cucumber; plant sample=CP3; plant location=NA -0.0 N.D. N.D. +0.2 -3.3
melonxylem MelonXylem +0.5 N.D. N.D. -0.1 -3.1
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