Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 nttnpA and LU632_RS08095 are separated by 120 nucleotidesLU632_RS08095 and elaB are separated by 190 nucleotideselaB and menD are separated by 332 nucleotidesmenD and menH overlap by 4 nucleotides LU632_RS08090: tnpA - IS200/IS605 family transposase, at 1,514,914 to 1,515,339 tnpA LU632_RS08095: LU632_RS08095 - glyoxalase, at 1,515,460 to 1,515,696 _RS08095 LU632_RS08100: elaB - stress response protein ElaB, at 1,515,887 to 1,516,198 elaB LU632_RS08105: menD - 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase, at 1,516,531 to 1,518,192 menD LU632_RS08110: menH - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,518,189 to 1,518,953 menH
Group Condition LU632_RS08090 LU632_RS08095 LU632_RS08100 LU632_RS08105 LU632_RS08110
tnpA elaB menD menH
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. -0.5 -0.4 +0.0 -0.4
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. -0.5 -0.3 -0.3 +0.1
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. -0.6 +0.3 -0.3 -0.2
cucxylem CucXylem N.D. -0.4 -0.0 -0.1 -0.1
hbm-cucxylem HBM-CucXylem N.D. -0.2 +0.0 -0.2 -0.1
cucxylem CucXylem N.D. -0.2 +0.1 -0.0 -0.3
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. -0.5 +0.1 -0.2 +0.2
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. +0.0 +0.1 +0.1 -0.4
in planta plant=Squash; plant sample=QP3; plant location=NA N.D. +0.4 -0.2 +0.2 -0.4
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. -0.1 -0.2 +0.0 +0.4
in planta plant=Melon; plant sample=M5; plant location=P2 N.D. +0.3 +0.5 -0.2 -0.5
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) N.D. +0.2 +0.5 -0.4 -0.0
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. -0.3 +0.4 +0.0 +0.1
melonxylem MelonXylem N.D. -0.2 +0.1 +0.2 +0.1
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. -0.2 +0.3 +0.3 -0.2
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. -0.2 +0.2 -0.1 +0.5
mjm9 MJM9 N.D. -0.1 +0.0 +0.2 +0.3
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. +0.1 +0.4 -0.2 -0.1
hbm-cucxylem HBM-CucXylem N.D. +0.2 +0.2 +0.0 +0.2
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. +0.5 +0.0 +0.3 -0.2
melonxylem MelonXylem N.D. +0.3 +0.1 +0.1 +0.1
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. -0.8 +1.1 +0.2 +0.1
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. -0.0 +0.2 +0.5 -0.1
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. -0.4 -0.1 +0.8 +0.5
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) N.D. +0.7 -0.1 -0.1 +0.4
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) N.D. +0.1 +0.2 +0.5 +0.1
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) N.D. +0.3 -0.0 +0.7 +0.1
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. +0.5 +0.6 +0.0 +0.3
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. +0.4 +0.4 +0.7 +0.2
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. +0.8 +0.4 +0.0 +0.6
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