Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS06875 and LU632_RS06880 overlap by 4 nucleotidesLU632_RS06880 and LU632_RS06885 are separated by 553 nucleotidesLU632_RS06885 and LU632_RS06890 overlap by 8 nucleotidesLU632_RS06890 and tnpA are separated by 121 nucleotides LU632_RS06875: LU632_RS06875 - DUF943 family protein, at 1,320,212 to 1,320,679 _RS06875 LU632_RS06880: LU632_RS06880 - DUF3289 family protein, at 1,320,676 to 1,321,515 _RS06880 LU632_RS06885: LU632_RS06885 - Phage antitermination protein q, at 1,322,069 to 1,322,362 _RS06885 LU632_RS06890: LU632_RS06890 - hypothetical protein, at 1,322,355 to 1,322,591 _RS06890 LU632_RS06895: tnpA - IS200/IS605 family transposase, at 1,322,713 to 1,323,147 tnpA
Group Condition LU632_RS06875 LU632_RS06880 LU632_RS06885 LU632_RS06890 LU632_RS06895
tnpA
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) -0.1 -0.1 -1.6 N.D. -0.3
in planta plant=Melon; plant sample=MP3; plant location=NA -0.2 -0.6 -1.0 N.D. -0.3
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) +0.1 +0.3 -1.9 N.D. -0.4
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -0.2 -0.4 -1.2 N.D. +0.3
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) +0.5 -0.4 -1.2 N.D. -0.2
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) +0.2 +0.4 -1.2 N.D. -0.5
cucxylem CucXylem -0.2 -0.2 -0.6 N.D. -0.1
melonxylem MelonXylem -0.1 -0.1 -0.4 N.D. -0.2
in planta plant=Melon; plant sample=MP2; plant location=NA -0.3 -0.4 +0.4 N.D. -0.3
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.1 +0.3 -1.1 N.D. +0.4
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) +0.1 -0.0 -0.7 N.D. +0.3
in planta plant=Cucumber; plant sample=CP3; plant location=NA -0.2 -0.2 +0.6 N.D. -0.3
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) +0.2 +0.4 -0.6 N.D. +0.3
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) +0.3 +0.4 -0.4 N.D. +0.1
in planta plant=Squash; plant sample=QP1; plant location=NA -0.2 -0.1 +0.3 N.D. +0.2
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -0.0 -0.3 +0.6 N.D. +0.0
in planta plant=Melon; plant sample=M2; plant location=P2 +0.2 +0.2 +0.4 N.D. -0.4
in planta plant=Squash; plant sample=QP2; plant location=NA +0.7 +0.1 -0.1 N.D. -0.3
mjm9 MJM9 -0.0 -0.1 +0.6 N.D. -0.0
in planta plant=Melon; plant sample=MP1; plant location=NA +0.1 +0.7 -0.6 N.D. +0.5
melonxylem MelonXylem +0.1 -0.0 +0.7 N.D. -0.1
in planta plant=Melon; plant sample=M5; plant location=P2 -0.1 -0.2 +0.8 N.D. +0.2
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.1 +0.1 +0.7 N.D. +0.0
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) +0.3 -0.3 +0.5 N.D. +0.3
in planta plant=Squash; plant sample=QP3; plant location=NA -0.1 +0.0 +0.6 N.D. +0.2
in planta plant=Melon; plant sample=M4; plant location=P2 +0.1 -0.0 +0.7 N.D. +0.3
hbm-cucxylem HBM-CucXylem -0.0 +0.1 +0.9 N.D. +0.2
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) -0.2 +0.7 +0.5 N.D. +0.4
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) +0.7 -0.4 +1.3 N.D. +0.3
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) +0.3 +0.3 +0.2 N.D. +1.1
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