Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS06025 and LU632_RS06030 are separated by 530 nucleotidesLU632_RS06030 and LU632_RS06035 overlap by 4 nucleotidesLU632_RS06035 and lysA are separated by 117 nucleotideslysA and galR are separated by 8 nucleotides LU632_RS06025: LU632_RS06025 - serine protease, at 1,143,145 to 1,143,768 _RS06025 LU632_RS06030: LU632_RS06030 - MFS transporter, at 1,144,299 to 1,145,374 _RS06030 LU632_RS06035: LU632_RS06035 - LysR family transcriptional regulator, at 1,145,371 to 1,146,291 _RS06035 LU632_RS06040: lysA - diaminopimelate decarboxylase, at 1,146,409 to 1,147,668 lysA LU632_RS06045: galR - HTH-type transcriptional regulator GalR, at 1,147,677 to 1,148,678 galR
Group Condition LU632_RS06025 LU632_RS06030 LU632_RS06035 LU632_RS06040 LU632_RS06045
lysA galR
hbm-sucrose HBM-Sucrose +0.2 +0.2 -0.1 -4.6 -4.9
hbm-glucose HBM-Glucose +0.1 +0.1 +0.1 -5.0 -4.5
hbm-glucose HBM-Glucose +0.2 +0.1 +0.2 -4.7 -4.9
hbm-sucrose HBM-Sucrose +0.0 +0.2 +0.1 -3.9 -5.3
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) -0.2 -0.2 -0.4 -3.7 -1.2
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) +0.1 +0.2 -0.8 -3.2 -1.0
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) -0.5 -0.0 -0.0 -3.3 -0.4
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) +0.1 -0.1 +0.4 -3.5 -0.7
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) -0.1 +0.1 -0.5 -3.1 +0.1
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) +0.3 +0.2 -0.1 -2.5 -1.3
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.2 +0.1 +0.2 -2.7 -0.7
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -0.4 +0.5 -0.1 -1.6 -1.3
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) +0.5 +0.3 -0.0 -2.7 -0.7
in planta plant=Melon; plant sample=M4; plant location=P2 -0.1 +0.2 -0.4 -1.6 -0.7
in planta plant=Melon; plant sample=M2; plant location=P2 +0.1 -0.5 -0.1 -1.6 -0.4
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) -0.0 +0.2 +0.8 -2.5 -0.9
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.0 -0.1 +0.4 -2.5 -0.2
in planta plant=Squash; plant sample=QP2; plant location=NA +0.1 -0.1 -0.1 -2.5 +0.2
in planta plant=Cucumber; plant sample=CP3; plant location=NA +0.2 -0.2 +0.1 -2.4 +0.1
in planta plant=Melon; plant sample=MP1; plant location=NA -0.3 -0.3 +0.4 -1.9 -0.0
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) +0.2 +0.0 +0.4 -2.0 -0.7
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) +0.3 -0.1 +0.1 -2.1 -0.3
in planta plant=Melon; plant sample=M5; plant location=P2 -0.2 -0.1 +0.6 -1.8 -0.3
in planta plant=Squash; plant sample=QP1; plant location=NA -0.2 +0.0 +0.6 -2.1 -0.2
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) +0.0 -0.1 +0.2 -0.9 -1.0
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) -0.0 +0.2 +0.3 -1.6 -0.4
in planta plant=Melon; plant sample=MP2; plant location=NA -0.0 +0.2 +0.4 -1.9 -0.1
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) +0.2 +0.2 -0.0 -0.7 -0.6
in planta plant=Squash; plant sample=QP3; plant location=NA +0.0 +0.3 +0.3 -1.1 -0.2
in planta plant=Melon; plant sample=MP3; plant location=NA -0.1 +0.1 +0.8 -1.0 -0.2
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