Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntsctL and LU632_RS03230 are separated by 86 nucleotidesLU632_RS03230 and LU632_RS03235 overlap by 14 nucleotidesLU632_RS03235 and sctC overlap by 8 nucleotidessctC and LU632_RS03245 are separated by 14 nucleotides LU632_RS03225: sctL - type III secretion system stator protein SctL, at 658,826 to 659,410 sctL LU632_RS03230: LU632_RS03230 - type III secretion system protein, at 659,497 to 659,733 _RS03230 LU632_RS03235: LU632_RS03235 - type III secretion system protein, at 659,720 to 660,151 _RS03235 LU632_RS03240: sctC - type III secretion system outer membrane ring subunit SctC, at 660,144 to 662,168 sctC LU632_RS03245: LU632_RS03245 - hypothetical protein, at 662,183 to 662,377 _RS03245
Group Condition LU632_RS03225 LU632_RS03230 LU632_RS03235 LU632_RS03240 LU632_RS03245
sctL sctC
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -1.7 N.D. -0.4 -1.2 -2.1
in planta plant=Melon; plant sample=M4; plant location=P2 -1.8 N.D. -0.3 -0.9 -1.8
in planta plant=Melon; plant sample=M5; plant location=P2 -0.5 N.D. -0.5 -1.0 -2.0
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) -1.4 N.D. -0.4 -0.5 -0.9
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.8 N.D. -0.4 -0.4 -1.5
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.6 N.D. -0.1 -0.6 -1.1
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) -0.6 N.D. -0.5 -0.5 -0.8
in planta plant=Melon; plant sample=M2; plant location=P2 -0.9 N.D. +0.2 -0.0 -1.5
in planta plant=Squash; plant sample=QP3; plant location=NA -1.3 N.D. -0.4 -0.0 -0.3
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) -0.6 N.D. -1.0 +0.2 -0.5
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -0.8 N.D. -1.1 +0.1 -0.0
in planta plant=Squash; plant sample=QP1; plant location=NA -0.5 N.D. +0.2 +0.5 -1.7
in planta plant=Squash; plant sample=QP2; plant location=NA -0.3 N.D. -0.2 +0.1 -1.1
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) +0.5 N.D. -0.3 -0.5 -1.2
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) +0.3 N.D. +0.1 -0.6 -1.1
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) -0.5 N.D. +0.0 -0.3 -0.4
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) +0.6 N.D. -0.2 -0.7 -0.9
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) -0.6 N.D. +0.3 -0.7 +0.2
in planta plant=Melon; plant sample=MP3; plant location=NA +0.0 N.D. +0.1 -0.2 -0.6
in planta plant=Melon; plant sample=MP1; plant location=NA -0.2 N.D. +0.0 -0.2 -0.3
in planta plant=Melon; plant sample=MP2; plant location=NA -0.5 N.D. -0.2 -0.4 +0.5
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) +0.0 N.D. +0.1 -0.4 -0.3
melonxylem MelonXylem +0.1 N.D. -0.1 -0.1 -0.4
hbm-glucose HBM-Glucose -0.8 N.D. +0.2 +0.1 -0.0
cucxylem CucXylem -0.3 N.D. +0.1 -0.0 -0.3
in planta plant=Cucumber; plant sample=CP3; plant location=NA -0.2 N.D. +0.1 -0.4 +0.3
hbm-sucrose HBM-Sucrose -0.1 N.D. +0.3 +0.1 +0.2
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) -0.4 N.D. -0.9 -0.2 +2.2
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) +0.5 N.D. -0.4 -0.1 +0.8
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) +0.4 N.D. +0.7 +0.1 -0.3
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