Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntcoaE and LU632_RS03020 are separated by 245 nucleotidesLU632_RS03020 and hofC are separated by 50 nucleotideshofC and gspE overlap by 23 nucleotidesgspE and ppdD overlap by 1 nucleotides LU632_RS03015: coaE - dephospho-CoA kinase, at 615,933 to 616,544 coaE LU632_RS03020: LU632_RS03020 - GMP reductase, at 616,790 to 617,830 _RS03020 LU632_RS03025: hofC - protein transport protein HofC, at 617,881 to 619,080 hofC LU632_RS03030: gspE - type II secretion system protein GspE, at 619,058 to 620,461 gspE LU632_RS03035: ppdD - prepilin peptidase-dependent pilin, at 620,461 to 620,913 ppdD
Group Condition LU632_RS03015 LU632_RS03020 LU632_RS03025 LU632_RS03030 LU632_RS03035
coaE hofC gspE ppdD
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) N.D. -0.2 -0.2 -0.2 -0.2
in planta plant=Melon; plant sample=MP2; plant location=NA N.D. +0.1 -0.2 -0.0 -0.7
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) N.D. -0.1 -0.3 +0.2 -0.5
cucxylem CucXylem N.D. +0.1 -0.2 -0.1 -0.3
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) N.D. -0.1 -0.2 +0.1 -0.2
cucxylem CucXylem N.D. +0.0 -0.0 -0.1 -0.4
in planta plant=Cucumber; plant sample=CP3; plant location=NA N.D. +0.2 -0.3 +0.1 -0.3
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) N.D. +0.1 -0.2 +0.0 -0.3
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) N.D. -0.1 +0.0 +0.1 -0.3
mjm9 MJM9 N.D. +0.1 -0.2 +0.1 -0.2
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) N.D. -0.2 -0.2 +0.1 +0.1
hbm-glucose HBM-Glucose N.D. +0.2 -0.1 +0.1 -0.3
in planta plant=Squash; plant sample=QP1; plant location=NA N.D. -0.2 +0.3 -0.2 -0.0
in planta plant=Melon; plant sample=MP3; plant location=NA N.D. +0.2 +0.0 +0.4 -0.7
melonxylem MelonXylem N.D. +0.2 -0.0 +0.1 -0.2
in planta plant=Squash; plant sample=QP2; plant location=NA N.D. +0.3 -0.2 +0.1 -0.0
in planta plant=Squash; plant sample=QP3; plant location=NA N.D. +0.4 -0.0 -0.0 -0.0
in planta plant=Melon; plant sample=M4; plant location=P2 N.D. +0.3 +0.0 +0.4 -0.5
in planta plant=Melon; plant sample=M5; plant location=P2 N.D. +0.4 +0.2 -0.2 -0.0
in planta plant=Melon; plant sample=M2; plant location=P2 N.D. +0.0 +0.2 -0.3 +0.5
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) N.D. +0.4 -0.2 +0.2 +0.1
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) N.D. -0.1 +0.2 +0.1 +0.4
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) N.D. +0.1 +0.4 +0.3 -0.0
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) N.D. +0.0 +0.1 +0.2 +0.7
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) N.D. +0.1 +0.3 +0.2 +0.4
in planta plant=Melon; plant sample=MP1; plant location=NA N.D. +0.1 +0.3 +0.6 +0.2
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) N.D. +0.1 +0.3 +0.2 +0.7
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) N.D. +0.2 +0.6 +0.0 +0.6
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) N.D. +0.1 +0.6 +0.2 +0.7
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) N.D. +0.3 +0.1 +0.6 +0.6
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