Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntdeoB and deoD are separated by 39 nucleotidesdeoD and LU632_RS02535 are separated by 187 nucleotidesLU632_RS02535 and LU632_RS02540 are separated by 519 nucleotidesLU632_RS02540 and serB are separated by 123 nucleotides LU632_RS02525: deoB - phosphopentomutase, at 501,107 to 502,330 deoB LU632_RS02530: deoD - purine-nucleoside phosphorylase, at 502,370 to 503,089 deoD LU632_RS02535: LU632_RS02535 - IS1 family transposase, at 503,277 to 503,974 _RS02535 LU632_RS02540: LU632_RS02540 - YtjB family periplasmic protein, at 504,494 to 505,156 _RS02540 LU632_RS02545: serB - phosphoserine phosphatase, at 505,280 to 506,257 serB
Group Condition LU632_RS02525 LU632_RS02530 LU632_RS02535 LU632_RS02540 LU632_RS02545
deoB deoD serB
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) -0.5 -0.8 N.D. +0.1 -4.0
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) -0.6 -0.2 N.D. -0.1 -4.0
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.9 -0.4 N.D. +1.0 -4.0
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) -1.1 +0.0 N.D. +0.0 -2.7
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) -0.7 -0.7 N.D. -0.7 -1.5
hbm-glucose HBM-Glucose -0.4 -0.3 N.D. -0.1 -2.3
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) -0.4 +0.2 N.D. +0.9 -3.7
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) -0.2 +0.2 N.D. +0.3 -3.4
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) -0.7 +0.2 N.D. -0.1 -2.4
cucxylem CucXylem -1.0 -0.3 N.D. +0.1 -1.9
cucxylem CucXylem -0.6 -0.3 N.D. +0.2 -2.0
hbm-sucrose HBM-Sucrose -0.2 -0.4 N.D. +0.1 -2.1
hbm-sucrose HBM-Sucrose -0.3 -0.4 N.D. +0.0 -2.0
in planta plant=Squash; plant sample=QP1; plant location=NA -0.3 -0.1 N.D. -1.2 -0.8
in planta plant=Cucumber; plant sample=CP3; plant location=NA -0.3 -0.5 N.D. -0.1 -1.4
hbm-glucose HBM-Glucose -0.2 -0.3 N.D. +0.2 -2.1
melonxylem MelonXylem -0.6 -0.4 N.D. +0.4 -1.9
hbm-cucxylem HBM-CucXylem -0.7 -0.1 N.D. +0.1 -1.6
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) -1.1 -0.3 N.D. -0.0 -0.9
in planta plant=Squash; plant sample=QP2; plant location=NA -0.3 -0.1 N.D. -0.9 -0.9
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) -0.6 -0.3 N.D. -0.6 -0.7
mjm9 MJM9 -0.2 -0.3 N.D. -0.3 -1.4
in planta plant=Melon; plant sample=M5; plant location=P2 -0.7 -0.1 N.D. -0.7 -0.6
melonxylem MelonXylem -0.5 -0.1 N.D. +0.4 -1.8
in planta plant=Melon; plant sample=MP3; plant location=NA -0.7 -0.1 N.D. -0.0 -1.2
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -0.7 -0.3 N.D. -0.0 -0.8
in planta plant=Squash; plant sample=QP3; plant location=NA -0.1 -0.2 N.D. -0.5 -0.9
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) -0.6 -0.2 N.D. +0.3 -0.6
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) -0.7 -0.4 N.D. +0.3 -0.4
in planta plant=Melon; plant sample=MP2; plant location=NA -0.2 +0.5 N.D. -0.1 -1.3
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