Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 nttssC and LU632_RS00720 are separated by 151 nucleotidesLU632_RS00720 and tssJ are separated by 130 nucleotidestssJ and tssK are separated by 3 nucleotidestssK and tssL overlap by 1 nucleotides LU632_RS00715: tssC - type VI secretion system contractile sheath large subunit, at 150,786 to 152,285 tssC LU632_RS00720: LU632_RS00720 - Hcp family type VI secretion system effector, at 152,437 to 152,922 _RS00720 LU632_RS00725: tssJ - type VI secretion system lipoprotein TssJ, at 153,053 to 153,601 tssJ LU632_RS00730: tssK - type VI secretion system baseplate subunit TssK, at 153,605 to 154,951 tssK LU632_RS00735: tssL - type VI secretion system protein TssL, long form, at 154,951 to 156,318 tssL
Group Condition LU632_RS00715 LU632_RS00720 LU632_RS00725 LU632_RS00730 LU632_RS00735
tssC tssJ tssK tssL
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) +0.1 -0.5 -1.2 -0.4 +0.2
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.0 +0.2 -0.8 -0.4 -0.3
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -0.4 -1.1 +0.0 +0.3 -0.0
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) +0.0 -0.2 -0.9 +0.1 -0.1
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) +0.1 -0.3 -0.9 +0.1 +0.0
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) +0.0 -0.4 -0.8 +0.1 +0.1
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) -0.1 +0.1 -0.8 -0.1 +0.2
in planta plant=Cucumber; plant sample=CP3; plant location=NA -0.2 -0.7 +0.4 -0.2 +0.1
in planta plant=Melon; plant sample=MP1; plant location=NA -0.2 -0.3 -0.1 +0.1 -0.1
in planta plant=Melon; plant sample=M4; plant location=P2 +0.2 +0.7 -1.3 +0.4 -0.2
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) +0.0 -0.1 -0.4 +0.0 +0.1
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -0.0 +0.2 -0.5 +0.1 +0.1
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.3 -0.3 -0.4 +0.5 +0.4
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) +0.1 +0.5 -0.9 -0.2 +0.4
in planta plant=Melon; plant sample=MP2; plant location=NA -0.2 -1.2 +1.1 +0.1 +0.2
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) -0.1 -0.1 +0.6 -0.0 -0.1
cucxylem CucXylem -0.1 +0.1 +0.6 -0.0 -0.1
melonxylem MelonXylem -0.1 +0.1 +0.4 -0.2 +0.1
cucxylem CucXylem -0.1 +0.4 +0.2 +0.0 -0.2
mjm9 MJM9 +0.1 +0.1 +0.4 -0.1 +0.1
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) -0.4 -0.1 +0.5 +0.4 +0.2
hbm-sucrose HBM-Sucrose -0.0 +0.5 +0.3 -0.1 +0.1
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) -0.1 +0.1 +0.6 -0.1 +0.3
hbm-cucxylem HBM-CucXylem -0.2 +0.7 +0.5 -0.1 -0.1
in planta plant=Melon; plant sample=MP3; plant location=NA -0.1 +0.3 +0.5 +0.3 +0.2
in planta plant=Melon; plant sample=M5; plant location=P2 +0.0 +0.7 -0.2 +0.3 +0.4
in planta plant=Squash; plant sample=QP3; plant location=NA +0.3 +1.3 +0.1 -0.1 +0.3
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) -0.2 +1.0 +0.9 +0.6 -0.1
in planta plant=Melon; plant sample=M2; plant location=P2 -0.2 -0.1 +2.5 +0.0 -0.1
in planta plant=Squash; plant sample=QP1; plant location=NA +0.3 +0.8 +0.5 +0.2 +0.7
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