Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS00690 and LU632_RS00695 are separated by 159 nucleotidesLU632_RS00695 and LU632_RS00700 are separated by 106 nucleotidesLU632_RS00700 and LU632_RS00705 overlap by 13 nucleotidesLU632_RS00705 and tssB are separated by 124 nucleotides LU632_RS00690: LU632_RS00690 - type 1 fimbrial protein, at 145,341 to 145,892 _RS00690 LU632_RS00695: LU632_RS00695 - fimbria/pilus periplasmic chaperone, at 146,052 to 146,798 _RS00695 LU632_RS00700: LU632_RS00700 - fimbrial biogenesis outer membrane usher protein, at 146,905 to 149,541 _RS00700 LU632_RS00705: LU632_RS00705 - type 1 fimbrial protein, at 149,529 to 150,110 _RS00705 LU632_RS00710: tssB - type VI secretion system contractile sheath small subunit, at 150,235 to 150,768 tssB
Group Condition LU632_RS00690 LU632_RS00695 LU632_RS00700 LU632_RS00705 LU632_RS00710
tssB
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) -0.7 -3.2 +0.0 -0.3 -0.6
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -0.8 -1.6 -0.1 +0.3 -1.8
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) -0.2 -3.5 +0.0 +0.1 +0.3
in planta Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1) -0.9 -1.4 +0.1 -0.3 -0.8
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) -0.1 -1.3 -0.1 -0.4 -0.0
in planta plant=Melon; plant sample=M5; plant location=P2 -0.7 -1.1 -0.1 -0.5 +0.3
in planta plant=Squash; plant sample=QP1; plant location=NA +0.2 -1.5 -0.3 +0.1 -0.3
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) +0.2 -1.8 -0.0 +0.1 -0.2
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -1.2 -0.9 -0.2 +0.4 +0.3
in planta plant=Cucumber; plant sample=CP3; plant location=NA +0.0 -0.5 -0.2 -0.4 -0.6
cucxylem CucXylem +0.1 -1.5 +0.0 -0.0 -0.1
hbm-cucxylem HBM-CucXylem +0.1 -1.3 -0.0 +0.1 -0.3
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -0.5 -1.6 +0.0 +0.6 +0.1
in planta plant=Melon; plant sample=MP3; plant location=NA +0.0 -0.3 -0.2 -0.6 -0.1
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) -0.7 -0.7 -0.0 +0.9 -0.7
in planta plant=Melon; plant sample=MP2; plant location=NA -0.6 -1.0 +0.1 +0.1 +0.3
hbm-sucrose HBM-Sucrose -0.2 -0.2 -0.1 -0.3 -0.2
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) -0.9 +0.2 -0.1 +0.4 -0.5
hbm-sucrose HBM-Sucrose +0.0 -0.4 -0.0 +0.1 -0.3
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) -0.4 -0.5 +0.1 +0.4 -0.1
in planta plant=Squash; plant sample=QP3; plant location=NA +0.3 -0.8 +0.0 -0.2 +0.2
in planta plant=Squash; plant sample=QP2; plant location=NA +0.2 -0.0 +0.1 -0.0 -0.6
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) -0.5 +0.8 +0.0 -0.5 -0.0
hbm-glucose HBM-Glucose +0.2 -0.6 -0.1 +0.1 +0.2
in planta plant=Melon; plant sample=M2; plant location=P2 +0.5 +0.2 +0.1 -0.6 -0.3
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) +0.1 +0.8 +0.1 -0.3 -0.4
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) +0.0 +1.1 +0.1 -0.2 -0.2
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) -0.4 +0.0 -0.1 +0.8 +0.7
in planta plant=Melon; plant sample=MP1; plant location=NA +0.1 +1.1 -0.0 +0.1 -0.2
in planta plant=Melon; plant sample=M4; plant location=P2 +0.8 -0.6 -0.1 +0.4 +0.6
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