Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS00655 and LU632_RS00660 overlap by 7 nucleotidesLU632_RS00660 and LU632_RS00665 are separated by 22 nucleotidesLU632_RS00665 and LU632_RS00670 are separated by 5 nucleotidesLU632_RS00670 and tssG are separated by 77 nucleotides LU632_RS00655: LU632_RS00655 - DotU family type IV/VI secretion system protein, at 134,958 to 135,569 _RS00655 LU632_RS00660: LU632_RS00660 - UDP-N-acetylglucosamine-transferase, at 135,563 to 136,903 _RS00660 LU632_RS00665: LU632_RS00665 - fimbrial protein, at 136,926 to 137,927 _RS00665 LU632_RS00670: LU632_RS00670 - type VI secretion system ImpA family N-terminal domain-containing protein, at 137,933 to 138,994 _RS00670 LU632_RS00675: tssG - type VI secretion system baseplate subunit TssG, at 139,072 to 140,097 tssG
Group Condition LU632_RS00655 LU632_RS00660 LU632_RS00665 LU632_RS00670 LU632_RS00675
tssG
in planta plant=Squash; plant sample=QP3; plant location=NA -1.4 -0.0 -0.3 -0.1 -0.3
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) -1.7 -0.6 +0.2 +0.2 +0.1
in planta Experiment:TE, Cucumber 5 Main Stem (TE-S-C5-MS) -1.7 -0.6 +0.6 +0.0 +0.3
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) -0.5 -0.7 +0.2 -0.0 -0.2
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) -0.7 -0.5 -0.1 -0.1 +0.3
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -1.4 +0.0 +0.4 -0.1 -0.0
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.3 -0.8 +0.1 -0.2 +0.2
in planta plant=Squash; plant sample=QP2; plant location=NA +0.3 -0.8 -0.4 +0.2 -0.1
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) -1.0 -0.3 +0.3 +0.0 +0.2
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) -0.0 -0.7 -0.1 +0.1 +0.0
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) +0.2 -0.2 -0.5 -0.4 +0.2
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) +0.5 -0.6 -0.2 -0.3 -0.1
in planta plant=Melon; plant sample=MP1; plant location=NA +0.9 -0.6 -0.5 -0.2 -0.1
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) -0.8 +0.2 -0.0 -0.3 +0.4
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) -0.3 -0.6 -0.1 +0.2 +0.2
in planta plant=Squash; plant sample=QP1; plant location=NA -0.1 -0.1 -0.2 +0.2 -0.3
hbm-cucxylem HBM-CucXylem -0.2 -0.3 -0.1 +0.1 +0.1
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) -0.9 -0.4 +0.1 +0.3 +0.6
hbm-cucxylem HBM-CucXylem +0.1 -0.4 -0.1 +0.1 +0.1
in planta Experiment:TE, Melon 5 Petiole 2 (TE-S-M5-P2) +0.4 -0.4 -0.1 -0.5 +0.3
hbm-glucose HBM-Glucose -0.2 -0.2 +0.1 +0.2 +0.1
in planta plant=Cucumber; plant sample=CP3; plant location=NA +0.3 -0.3 +0.1 -0.2 +0.1
in planta plant=Melon; plant sample=M4; plant location=P2 +0.4 -0.1 -0.1 -0.4 +0.2
mjm9 MJM9 -0.1 -0.2 +0.0 +0.3 +0.1
in planta plant=Melon; plant sample=MP2; plant location=NA +0.4 -0.4 +0.2 -0.0 +0.1
hbm-sucrose HBM-Sucrose -0.2 +0.2 -0.0 +0.2 +0.1
in planta plant=Melon; plant sample=MP3; plant location=NA -0.1 -0.3 +0.2 +0.1 +0.5
in planta plant=Melon; plant sample=M2; plant location=P2 +0.2 -0.0 -0.3 +0.6 +0.3
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) +1.4 -0.8 +0.3 +0.5 -0.0
in planta plant=Melon; plant sample=M5; plant location=P2 +3.0 +0.4 +0.1 +0.2 +0.4
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