Fitness for 5 genes in Erwinia tracheiphila SCR3

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500 ntLU632_RS00420 and sctJ overlap by 4 nucleotidessctJ and sctI overlap by 1 nucleotidessctI and sctF are separated by 54 nucleotidessctF and LU632_RS00440 are separated by 3 nucleotides LU632_RS00420: LU632_RS00420 - type III secretion system protein, at 87,621 to 88,175 _RS00420 LU632_RS00425: sctJ - type III secretion inner membrane ring lipoprotein SctJ, at 88,172 to 88,942 sctJ LU632_RS00430: sctI - type III secretion system inner rod subunit SctI, at 88,942 to 89,265 sctI LU632_RS00435: sctF - type III secretion system needle filament subunit SctF, at 89,320 to 89,592 sctF LU632_RS00440: LU632_RS00440 - PrgH/EprH family type III secretion apparatus protein, at 89,596 to 90,849 _RS00440
Group Condition LU632_RS00420 LU632_RS00425 LU632_RS00430 LU632_RS00435 LU632_RS00440
sctJ sctI sctF
in planta plant=Squash; plant sample=QP3; plant location=NA -0.6 +0.1 N.D. -1.7 -0.3
in planta plant=Cucumber; plant sample=CP3; plant location=NA -0.7 +0.2 N.D. -1.9 -0.0
in planta Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) -0.7 -0.2 N.D. -0.2 -0.8
in planta plant=Squash; plant sample=QP1; plant location=NA -0.0 +0.3 N.D. -1.2 -0.8
in planta plant=Melon; plant sample=M2; plant location=P2 -1.1 +0.1 N.D. -0.6 -0.1
cucxylem CucXylem +0.0 -0.4 N.D. -0.6 -0.3
in planta plant=Squash; plant sample=QP2; plant location=NA +0.6 -0.7 N.D. -1.0 -0.0
in planta plant=Melon; plant sample=MP3; plant location=NA -0.3 -0.0 N.D. -0.8 +0.1
in planta Experiment:PE, population C11, passage 1 (PE-S-C11-P1) +0.8 -0.9 N.D. -1.1 +0.3
hbm-glucose HBM-Glucose +0.6 -0.2 N.D. -0.8 -0.3
in planta Experiment:TE2, Melon 5 Petiole 1 (TE2-S-M5-P1) +0.3 -0.5 N.D. +0.3 -0.4
in planta Experiment:TE, Melon 3 Main Stem (TE-S-M3-MS) +0.5 +0.5 N.D. -0.6 -0.5
in planta Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2) +0.5 +0.2 N.D. -1.1 +0.4
in planta plant=Melon; plant sample=M4; plant location=P2 +0.2 -0.9 N.D. +0.7 +0.1
in planta plant=Melon; plant sample=M5; plant location=P2 +0.4 -0.2 N.D. -0.6 +0.6
hbm-cucxylem HBM-CucXylem +0.6 -0.2 N.D. -0.2 -0.0
hbm-cucxylem HBM-CucXylem +0.5 -0.1 N.D. -0.4 +0.2
in planta Experiment:TE, Cucumber 5 Petiole 2 (TE-S-C5-P2) +0.6 +0.6 N.D. -0.9 -0.1
in planta Experiment:TE2, Melon 5 Petiole 2 (TE2-S-M5-P2) +0.2 -0.9 N.D. +1.1 -0.1
in planta Experiment:TE2, Melon 1 Petiole 1 (TE2-S-M1-P1) -0.6 -0.7 N.D. +1.1 +0.5
in planta plant=Melon; plant sample=MP2; plant location=NA +0.1 +0.3 N.D. -0.8 +0.7
in planta Experiment:TE2, Melon 1 Petiole 2 (TE2-S-M1-P2) -0.7 -0.0 N.D. +0.9 +0.3
in planta plant=Melon; plant sample=MP1; plant location=NA +1.2 -0.0 N.D. -0.6 +0.1
cucxylem CucXylem +0.2 -0.1 N.D. +0.6 +0.1
mjm9 MJM9 +0.4 -0.1 N.D. +0.4 +0.3
in planta Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1) +1.0 -0.4 N.D. +0.4 -0.0
hbm-sucrose HBM-Sucrose +0.7 -0.3 N.D. +0.6 -0.0
in planta Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS) -0.2 +0.2 N.D. +1.8 +0.3
in planta Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1) -0.6 -0.4 N.D. +2.8 +0.5
in planta Experiment:TE, Melon 3 Petiole 2 (TE-S-M3-P2) +0.7 +0.6 N.D. +1.1 -0.0
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