Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS16480 and LRK53_RS16485 are separated by 4 nucleotidesLRK53_RS16485 and LRK53_RS16490 are separated by 143 nucleotidesLRK53_RS16490 and LRK53_RS16495 are separated by 286 nucleotidesLRK53_RS16495 and LRK53_RS16500 are separated by 95 nucleotides LRK53_RS16480: LRK53_RS16480 - glutathione S-transferase family protein, at 3,630,259 to 3,630,897 _RS16480 LRK53_RS16485: LRK53_RS16485 - GIY-YIG nuclease family protein, at 3,630,902 to 3,631,177 _RS16485 LRK53_RS16490: LRK53_RS16490 - phosphoenolpyruvate carboxylase, at 3,631,321 to 3,634,026 _RS16490 LRK53_RS16495: LRK53_RS16495 - adenosylhomocysteinase, at 3,634,313 to 3,635,752 _RS16495 LRK53_RS16500: LRK53_RS16500 - DUF3228 family protein, at 3,635,848 to 3,636,405 _RS16500
Group Condition LRK53_RS16480 LRK53_RS16485 LRK53_RS16490 LRK53_RS16495 LRK53_RS16500
nutrient defined media with L-Serine -0.1 -0.1 -3.3 -1.0 -0.0
nutrient defined media with D-Glucose -0.1 -0.0 -3.1 -1.1 +0.0
nutrient defined media with D-Glucose +0.2 -0.1 -3.1 -1.0 +0.1
nutrient defined media with L-Serine +0.1 +0.4 -3.2 -0.9 +0.1
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM -0.2 -0.5 -0.1 -1.2 -0.4
nutrient defined media with 20AA_mix -0.1 -0.5 -0.8 -0.8 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.7 +0.3 -0.1 -1.4 -0.2
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM +0.0 -0.8 -0.1 -1.1 +0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 -0.3 -0.1 -1.5 -0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.1 -0.5 -0.0 -1.2 -0.0
nutrient defined media with 20AA_mix +0.1 -0.1 -0.9 -0.8 -0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 -0.8 +0.1 -1.4 +0.2
pH pH4 +0.1 -0.9 -0.0 -0.7 -0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.1 -0.6 -0.1 -1.2 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.3 -0.7 +0.0 -1.2 +0.2
stress R2A_PIPES with Cobalt chloride 512 uM -0.2 -0.3 +0.2 -0.9 -0.2
stress R2A_PIPES with Cobalt chloride 1024 uM -0.0 -0.5 +0.1 -0.8 +0.1
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.2 -0.4 +0.0 -1.1 +0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.1 +0.1 -0.0 -1.4 +0.1
pH pH4.5 -0.1 -0.4 -0.1 -0.8 +0.2
pH pH4.8 -0.0 -0.4 +0.2 -0.8 -0.0
pH pH5 -0.2 +0.4 -0.0 -1.0 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.1 -0.3 +0.0 -0.9 +0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 +0.7 -0.1 -1.4 +0.1
no stress control R2A_PIPES no stress control +0.2 -0.2 +0.2 -1.0 -0.1
biofilm assay; planktonic sample planktonic; Day4; SGW; +0.1 -0.8 +0.2 -0.6 +0.4
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM +0.2 -0.3 +0.2 -1.0 +0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.3 +0.0 +0.2 -1.4 +0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.0 +0.4 -0.0 -1.1 +0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 -0.8 +0.3 -0.3 +0.7
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