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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp000427505 FW510-R12
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK53_RS16030 and LRK53_RS16035 are separated by 240 nucleotides
LRK53_RS16035 and LRK53_RS16040 are separated by 30 nucleotides
LRK53_RS16040 and LRK53_RS16045 are separated by 242 nucleotides
LRK53_RS16045 and LRK53_RS16050 are separated by 125 nucleotides
LRK53_RS16030: LRK53_RS16030 - SET domain-containing protein-lysine N-methyltransferase, at 3,521,014 to 3,521,481
_RS16030
LRK53_RS16035: LRK53_RS16035 - hypothetical protein, at 3,521,722 to 3,522,198
_RS16035
LRK53_RS16040: LRK53_RS16040 - acyl-CoA dehydrogenase C-terminal domain-containing protein, at 3,522,229 to 3,524,019
_RS16040
LRK53_RS16045: LRK53_RS16045 - hypothetical protein, at 3,524,262 to 3,524,786
_RS16045
LRK53_RS16050: LRK53_RS16050 - hypothetical protein, at 3,524,912 to 3,525,511
_RS16050
Group
Condition
LRK53
_RS16030
LRK53
_RS16035
LRK53
_RS16040
LRK53
_RS16045
LRK53
_RS16050
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
-0.2
-2.3
-0.1
-0.2
-0.8
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
+0.1
-2.5
-0.3
+0.4
-0.3
biofilm assay; planktonic sample
Planktonic; Day2; SGW; pH7
-0.1
-1.6
+0.0
-0.2
-0.4
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
+0.1
-1.5
-0.1
-0.3
-0.4
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
-0.3
-1.1
-0.4
-0.3
+0.2
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.4
-0.7
-0.2
-0.3
-1.0
biofilm assay; planktonic sample
planktonic; Day1; NLDM;
-0.3
-1.4
+0.3
-0.3
+0.0
stress
R2A_PIPES with Aluminum chloride 1.125 mM
+0.0
-0.7
-0.1
-0.3
-0.5
biofilm assay; biofilm sample
Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM
-0.1
-1.0
-0.0
-0.2
-0.2
stress
R2A_PIPES with Zinc chloride 5120 uM
-0.3
-0.8
-0.3
-0.3
+0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
-0.9
-0.0
-0.0
-0.1
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
-0.3
-0.7
-0.1
+0.2
-0.3
pH
pH5
-0.0
-0.6
-0.3
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
-0.0
-0.9
-0.1
-0.2
+0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
-0.5
-0.0
-0.0
-0.2
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Aluminum chloride 1mM
-0.4
-0.5
-0.3
+0.2
+0.1
nutrient
defined media with L-Serine
-0.5
+0.3
-0.3
-0.4
+0.1
no stress control
R2A_PIPES no stress control
-0.3
-0.4
+0.2
-0.0
-0.3
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
-0.3
-0.6
-0.1
-0.0
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
+0.2
-0.1
-0.3
-0.1
stress
R2A_PIPES with Aluminum chloride 1.125 mM
-0.3
-0.2
-0.0
-0.3
+0.3
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Aluminum chloride 1mM
-0.2
+0.5
-0.5
-0.0
-0.2
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
-0.2
+0.4
-0.0
-0.1
-0.4
nutrient
defined media with L-Serine
+0.1
-0.5
-0.0
-0.1
+0.3
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.5
-0.5
-0.2
-0.2
+0.3
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.4
-0.1
-0.4
-0.2
+0.3
pH
pH4
-0.3
+0.4
+0.2
+0.1
-0.1
pH
pH4.5
+0.1
+0.6
+0.0
-0.2
-0.2
biofilm assay; biofilm sample
Biofilm; Day2; SGW; pH7
+0.4
-0.3
-0.1
-0.0
+0.6
nutrient
defined media with 20AA_mix
+0.3
+0.8
+0.1
-0.1
+0.0
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