Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS15820 and LRK53_RS15825 are separated by 56 nucleotidesLRK53_RS15825 and LRK53_RS15830 are separated by 104 nucleotidesLRK53_RS15830 and LRK53_RS15835 are separated by 160 nucleotidesLRK53_RS15835 and LRK53_RS15840 are separated by 36 nucleotides LRK53_RS15820: LRK53_RS15820 - metal/formaldehyde-sensitive transcriptional repressor, at 3,458,548 to 3,458,817 _RS15820 LRK53_RS15825: LRK53_RS15825 - CDF family Co(II)/Ni(II) efflux transporter DmeF, at 3,458,874 to 3,459,839 _RS15825 LRK53_RS15830: LRK53_RS15830 - ATP-dependent DNA helicase, at 3,459,944 to 3,461,890 _RS15830 LRK53_RS15835: LRK53_RS15835 - MAPEG family protein, at 3,462,051 to 3,462,440 _RS15835 LRK53_RS15840: LRK53_RS15840 - tetratricopeptide repeat protein, at 3,462,477 to 3,463,001 _RS15840
Group Condition LRK53_RS15820 LRK53_RS15825 LRK53_RS15830 LRK53_RS15835 LRK53_RS15840
stress R2A_PIPES with Cobalt chloride 1024 uM -0.3 -3.2 +0.0 -0.1 -0.6
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -2.0 -0.1 -0.2 -0.9 -0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; -2.3 -0.3 -0.1 +0.0 -0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -2.4 -0.2 -0.1 +0.3 -0.4
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -2.0 -0.0 +0.0 +0.4 -1.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -2.2 -0.0 -0.0 +0.0 -0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.7 -0.1 -0.0 -0.5 -0.8
stress R2A_PIPES with Cobalt chloride 1024 uM +1.4 -3.1 -0.0 +0.0 +0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -1.5 -0.1 +0.1 -0.2 +0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.9 -0.1 -0.2 -0.3 +0.3
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM +0.3 +0.1 -0.0 -0.7 -0.7
stress R2A_PIPES with Cobalt chloride 512 uM +1.5 -1.1 -0.1 -0.3 -0.5
pH pH4.5 +0.6 +0.1 -0.1 -0.5 -0.6
biofilm assay; biofilm sample biofilm; Day1; NLDM; +0.8 -0.1 -0.2 -0.1 -0.5
stress R2A_PIPES with Cobalt chloride 512 uM +1.4 -0.9 +0.1 -0.0 -0.4
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +1.1 +0.0 +0.1 -0.2 -0.6
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +1.1 +0.0 -0.1 -0.5 -0.2
pH pH5 +1.2 -0.1 +0.0 -0.3 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; +1.4 -0.4 +0.0 +0.3 -0.8
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM +1.0 +0.2 -0.1 -0.6 -0.0
pH pH4 +1.0 +0.1 +0.1 -0.1 -0.5
pH pH4.8 +1.2 +0.1 -0.0 -0.2 -0.2
stress R2A_PIPES with Aluminum chloride 1.125 mM +1.5 +0.1 +0.0 -0.4 -0.0
nutrient defined media with 20AA_mix +1.5 +0.1 +0.1 +0.0 -0.5
stress R2A_PIPES with Zinc chloride 5120 uM +2.1 -0.1 -0.0 -0.5 -0.1
nutrient defined media with L-Serine +2.0 +0.0 -0.1 +0.1 -0.5
stress R2A_PIPES with Nickel (II) chloride 848 uM +2.1 -0.0 -0.1 +0.0 +0.1
nutrient defined media with L-Serine +2.8 -0.0 +0.1 -0.2 -0.5
no stress control R2A_PIPES no stress control +2.1 +0.2 +0.3 -0.3 +0.0
nutrient defined media with D-Glucose +2.4 +0.1 +0.1 +0.0 -0.2
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