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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp000427505 FW510-R12
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK53_RS14560 and LRK53_RS14565 are separated by 14 nucleotides
LRK53_RS14565 and LRK53_RS14570 are separated by 236 nucleotides
LRK53_RS14570 and LRK53_RS14575 are separated by 27 nucleotides
LRK53_RS14575 and LRK53_RS14580 overlap by 4 nucleotides
LRK53_RS14560: LRK53_RS14560 - hypothetical protein, at 3,189,957 to 3,190,262
_RS14560
LRK53_RS14565: LRK53_RS14565 - hypothetical protein, at 3,190,277 to 3,190,780
_RS14565
LRK53_RS14570: LRK53_RS14570 - molybdate ABC transporter substrate-binding protein, at 3,191,017 to 3,191,883
_RS14570
LRK53_RS14575: LRK53_RS14575 - molybdate ABC transporter permease subunit, at 3,191,911 to 3,192,582
_RS14575
LRK53_RS14580: LRK53_RS14580 - molybdenum ABC transporter ATP-binding protein, at 3,192,579 to 3,193,652
_RS14580
Group
Condition
LRK53
_RS14560
LRK53
_RS14565
LRK53
_RS14570
LRK53
_RS14575
LRK53
_RS14580
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.4
+0.0
-0.0
-0.4
nutrient
defined media with 20AA_mix
N.D.
-0.3
+0.2
+0.1
-0.7
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Aluminum chloride 1mM
N.D.
+0.2
-0.3
-0.2
-0.4
biofilm assay; planktonic sample
planktonic; Day4; SGW;
N.D.
+0.0
+0.2
-0.3
-0.6
nutrient
defined media with 20AA_mix
N.D.
-0.1
-0.3
-0.2
-0.1
nutrient
defined media with L-Serine
N.D.
-0.3
-0.1
+0.1
-0.3
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Aluminum chloride 1mM
N.D.
-0.2
+0.1
-0.6
+0.0
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
N.D.
+0.3
-0.5
-0.1
-0.2
biofilm assay; planktonic sample
planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
+0.2
-0.5
-0.2
-0.0
stress
R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM
N.D.
-0.2
+0.1
-0.3
-0.2
nutrient
defined media with L-Serine
N.D.
-0.3
+0.0
-0.0
-0.2
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
N.D.
+0.2
-0.1
-0.3
-0.3
stress
R2A_PIPES with Zinc chloride 5120 uM
N.D.
-0.3
-0.0
-0.3
+0.2
pH
pH4.8
N.D.
-0.2
+0.1
+0.1
-0.3
stress
R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM
N.D.
-0.3
+0.0
-0.2
+0.2
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
N.D.
+0.1
+0.0
-0.0
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.2
+0.1
-0.3
+0.1
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
N.D.
-0.1
+0.2
-0.1
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
+0.0
-0.1
-0.3
+0.2
no stress control
R2A_PIPES no stress control
N.D.
-0.2
-0.1
+0.1
+0.1
pH
pH4.8
N.D.
+0.1
+0.1
-0.0
-0.3
biofilm assay; biofilm sample
biofilm; Day2; NLDM;
N.D.
+0.2
+0.2
-0.2
-0.3
stress
R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
N.D.
-0.1
+0.1
-0.2
+0.1
biofilm assay; planktonic sample
planktonic; Day1; NLDM;
N.D.
+0.1
+0.3
-0.4
+0.1
pH
pH4
N.D.
-0.2
+0.2
+0.1
-0.1
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
N.D.
-0.3
+0.2
-0.1
+0.3
pH
pH4.5
N.D.
-0.2
+0.2
+0.1
+0.1
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
N.D.
-0.2
+0.2
+0.1
+0.1
biofilm assay; biofilm sample
Biofilm; Day2; SGW; pH7
N.D.
+0.3
+0.2
-0.1
+0.1
stress
R2A_PIPES with Nickel (II) chloride 848 uM
N.D.
+0.3
+0.1
-0.0
+0.1
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