Fitness for 5 genes in Rhodanobacter sp000427505 FW510-R12

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500 ntLRK53_RS12830 and LRK53_RS12835 are separated by 306 nucleotidesLRK53_RS12835 and LRK53_RS12840 are separated by 38 nucleotidesLRK53_RS12840 and LRK53_RS12845 overlap by 4 nucleotidesLRK53_RS12845 and LRK53_RS12850 are separated by 128 nucleotides LRK53_RS12830: LRK53_RS12830 - YkgJ family cysteine cluster protein, at 2,836,939 to 2,837,271 _RS12830 LRK53_RS12835: LRK53_RS12835 - IS110 family transposase, at 2,837,578 to 2,838,600 _RS12835 LRK53_RS12840: LRK53_RS12840 - rRNA pseudouridine synthase, at 2,838,639 to 2,839,340 _RS12840 LRK53_RS12845: LRK53_RS12845 - class I SAM-dependent methyltransferase, at 2,839,337 to 2,840,407 _RS12845 LRK53_RS12850: LRK53_RS12850 - oligopeptide transporter, OPT family, at 2,840,536 to 2,842,530 _RS12850
Group Condition LRK53_RS12830 LRK53_RS12835 LRK53_RS12840 LRK53_RS12845 LRK53_RS12850
biofilm assay; planktonic sample planktonic; Day1; NLDM; -1.7 N.D. -0.6 -0.6 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.8 N.D. -0.5 -0.6 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; -1.3 N.D. -0.5 -0.7 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.9 N.D. -0.6 -0.1 +0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -1.4 N.D. -0.3 -0.6 -0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -2.4 N.D. -0.1 +0.3 +0.1
biofilm assay; biofilm sample Biofilm; Day2; SGW; pH7 -2.0 N.D. -0.1 +0.0 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -1.4 N.D. -0.3 -0.4 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -1.6 N.D. +0.3 -0.2 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -1.2 N.D. -0.5 +0.1 +0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -1.4 N.D. +0.0 -0.2 -0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; Aluminum chloride 1mM -1.0 N.D. -0.1 -0.1 -0.3
nutrient defined media with D-Glucose -1.4 N.D. +0.1 -0.2 +0.1
no stress control R2A_PIPES no stress control -0.8 N.D. -0.2 -0.4 -0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; -0.4 N.D. -0.7 -0.2 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.0 N.D. -0.2 +0.3 -0.1
pH pH4.8 -0.8 N.D. +0.2 -0.3 +0.1
nldm low p NLDM_defined low phosphorus; midlog -0.5 N.D. -0.3 +0.2 -0.1
pH pH4 -1.0 N.D. -0.0 +0.3 +0.0
nldm low p NLDM_defined low phosphorus; midlog -1.1 N.D. +0.1 +0.4 -0.0
nldm control NLDM_defined; midlog -0.9 N.D. +0.2 +0.3 -0.0
nldm low iron NLDM_defined low iron; midlog -0.8 N.D. -0.0 +0.4 -0.0
nldm control NLDM_defined; midlog -0.8 N.D. +0.0 +0.4 +0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM +1.1 N.D. -0.3 -0.7 +0.0
no stress control R2A_PIPES no stress control +1.0 N.D. -0.1 -0.4 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.7 N.D. -0.3 +0.1 +0.1
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM +1.0 N.D. -0.1 -0.2 +0.1
biofilm assay; biofilm sample biofilm; Day4; SGW; Aluminum chloride 1mM +1.1 N.D. -0.0 -0.1 -0.1
biofilm assay; planktonic sample planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +1.1 N.D. -0.2 +0.2 -0.0
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.8 N.D. -0.0 +0.4 +0.1
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